Hello Daniel--
> Hello, I'm attempting to run the script targetRMSD on my ensemble. I have > had success looking at a specific seqgment, such as resid 10:20 however I > ultimately want to use this script to look at the strands of my beta-barrel > and as such would need to combine 8 different segments, i.e resid 10:20 AND > resid 50:60 etc, however I cannot find a way for the script to recognize > multiple segments. Keith nailed it: your selection should be something like resid 10:20 or resid 50:60 so the command would be something like > % targetRMSD -seletion "resid 10:17 and name CA" avg.pdb struc*.pdb > targetRMSD -selection "(resid 10:17 or resid 50:60) and name CA" avg.pdb struc*.pdb best regards-- Charles
-- Charles Schwieters email: [email protected] www: http://schwieters.org/cds phone: (301) 402-4914 PGP key: http://schwieters.org/cds/pgp.txt
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