** Changed in: debian
Status: Confirmed => Fix Released
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https://bugs.launchpad.net/bugs/1774065
Title:
doctests fail with numpy 1.14
Status in Yade:
New
Status in Debian:
Fix Released
Bug description:
======================================================================
FAIL: saveDataTxt (yade.plot)
Doctest: yade.plot.saveDataTxt
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/lib/python2.7/doctest.py", line 2226, in runTest
raise self.failureException(self.format_failure(new.getvalue()))
AssertionError: Failed doctest test for yade.plot.saveDataTxt
File "/usr/lib/x86_64-linux-gnu/yade/py/yade/plot.py", line 614, in
saveDataTxt
----------------------------------------------------------------------
File "/usr/lib/x86_64-linux-gnu/yade/py/yade/plot.py", line 626, in
yade.plot.saveDataTxt
Failed example:
d=numpy.genfromtxt('/tmp/dataFile.txt.bz2',dtype=None,names=True)
Exception raised:
Traceback (most recent call last):
File "/usr/lib/python2.7/doctest.py", line 1315, in __run
compileflags, 1) in test.globs
File "<doctest yade.plot.saveDataTxt[8]>", line 1, in <module>
d=numpy.genfromtxt('/tmp/dataFile.txt.bz2',dtype=None,names=True)
File "/usr/lib/python2.7/dist-packages/numpy/lib/npyio.py", line 1689,
in genfromtxt
fhd = iter(np.lib._datasource.open(fname, 'rt', encoding=encoding))
File "/usr/lib/python2.7/dist-packages/numpy/lib/_datasource.py", line
260, in open
return ds.open(path, mode, encoding=encoding, newline=newline)
File "/usr/lib/python2.7/dist-packages/numpy/lib/_datasource.py", line
614, in open
encoding=encoding, newline=newline)
File "/usr/lib/python2.7/dist-packages/numpy/lib/_datasource.py", line
88, in _python2_bz2open
raise ValueError("bz2 text files not supported in python2")
ValueError: bz2 text files not supported in python2
----------------------------------------------------------------------
File "/usr/lib/x86_64-linux-gnu/yade/py/yade/plot.py", line 627, in
yade.plot.saveDataTxt
Failed example:
d['a']
Exception raised:
Traceback (most recent call last):
File "/usr/lib/python2.7/doctest.py", line 1315, in __run
compileflags, 1) in test.globs
File "<doctest yade.plot.saveDataTxt[9]>", line 1, in <module>
d['a']
NameError: name 'd' is not defined
----------------------------------------------------------------------
File "/usr/lib/x86_64-linux-gnu/yade/py/yade/plot.py", line 629, in
yade.plot.saveDataTxt
Failed example:
d['b']
Exception raised:
Traceback (most recent call last):
File "/usr/lib/python2.7/doctest.py", line 1315, in __run
compileflags, 1) in test.globs
File "<doctest yade.plot.saveDataTxt[10]>", line 1, in <module>
d['b']
NameError: name 'd' is not defined
----------------------------------------------------------------------
Ran 58 tests in 1.063s
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