New question #675256 on Yade: https://answers.launchpad.net/yade/+question/675256
Hello I am trying to couple my 3-D LBM(Lattice Boltzmann Method) code, parallelized with MPI and written in C++, with yade. I used Cython for wrapping the C++ code. At the moment I can import my parallel and serial (without MPI header) code to python and run it. Also, I can import my serial code to Yade but when it reaches to parallel code I am not able to run it in Yade. The error I am getting is: ///////////////////////////////////////////////////////////////////////////////////////////// Welcome to Yade 2018.02b TCP python prompt on localhost:9000, auth cookie `dakyus' XMLRPC info provider on http://localhost:21000 Running script ex1.py -------------------------------------------------------------------------- It looks like opal_init failed for some reason; your parallel process is likely to abort. There are many reasons that a parallel process can fail during opal_init; some of which are due to configuration or environment problems. This failure appears to be an internal failure; here's some additional information (which may only be relevant to an Open MPI developer): opal_error_register failed --> Returned value -2 instead of OPAL_SUCCESS -------------------------------------------------------------------------- -------------------------------------------------------------------------- It looks like MPI_INIT failed for some reason; your parallel process is likely to abort. There are many reasons that a parallel process can fail during MPI_INIT; some of which are due to configuration or environment problems. This failure appears to be an internal failure; here's some additional information (which may only be relevant to an Open MPI developer): ompi_mpi_init: opal_init_util failed --> Returned "(null)" (-2) instead of "Success" (0) -------------------------------------------------------------------------- *** An error occurred in MPI_Init_thread *** on a NULL communicator *** MPI_ERRORS_ARE_FATAL (processes in this communicator will now abort, *** and potentially your MPI job) [ata-B:6940] Local abort before MPI_INIT completed completed successfully, but am not able to aggregate error messages, and not able to guarantee that all other processes were killed! ///////////////////////////////////////////////////////////////////////////////////////////// Do you have any recommendations and suggestions? Thanks in advance for your help. -- You received this question notification because your team yade-users is an answer contact for Yade. _______________________________________________ Mailing list: https://launchpad.net/~yade-users Post to : [email protected] Unsubscribe : https://launchpad.net/~yade-users More help : https://help.launchpad.net/ListHelp
