Question #683949 on Yade changed:
https://answers.launchpad.net/yade/+question/683949

    Status: Open => Needs information

Jan Stránský requested more information:
Hello,
I have tried your code (using Yade 2018.02b), but found no "weird data" (did 
not try too much, thought).. Please be more specific (I don't want to check 
2500 lines of data file to find one discrepancy :-)
It would help, if you could create a MWE [1], i.e. minimal from point of both 
code and simulation (number of particles, running time).
cheers
Jan

[1] https://www.yade-dem.org/wiki/Howtoask

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