New question #685676 on Yade: https://answers.launchpad.net/yade/+question/685676
Hi all, I just downloaded the latest trunk from gitlab and got this error message at 97% compilation: [ 97%] Linking CXX shared library lib/x86_64-linux-gnu/_packPredicates.so /media/scholtes/sdb/yade/sources/trunk/trunk/py/wrapper/yadeWrapper.cpp: In member function ‘PyObject* yade::pyOmega::bufferFromIntrsct(const boost::shared_ptr<yade::Subdomain>&, unsigned int, unsigned int, bool)’: /media/scholtes/sdb/yade/sources/trunk/trunk/py/wrapper/yadeWrapper.cpp:728:136: error: ‘PyMemoryView_FromMemory’ was not declared in this scope return PyMemoryView_FromMemory((char*) (subD->intersections[rank].data()), subD->intersections[rank].size()*sizeof(Body::id_t),PyBUF_WRITE);} ^ /media/scholtes/sdb/yade/sources/trunk/trunk/py/wrapper/yadeWrapper.cpp:731:145: error: ‘PyMemoryView_FromMemory’ was not declared in this scope return PyMemoryView_FromMemory((char*) &(subD->mirrorIntersections[rank][0]), subD->mirrorIntersections[rank].size()*sizeof(Body::id_t),PyBUF_WRITE);} ^ [ 97%] Built target _packPredicates py/CMakeFiles/wrapper.dir/build.make:62: recipe for target 'py/CMakeFiles/wrapper.dir/wrapper/yadeWrapper.cpp.o' failed I am on Ubuntu 16.04.06 and here is what cmake returned: -- The C compiler identification is GNU 5.4.0 -- The CXX compiler identification is GNU 5.4.0 -- Check for working C compiler: /usr/bin/cc -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- Version is set to 2019-11-05.git-35899c7 -- GCC Version >= 4.8. Adding -ftrack-macro-expansion=0 -- GCC Version >= 4.8. Adding -save-temps -- GCC Version >= 4.9. Adding -fstack-protector-strong -- Found Eigen3: /usr/include/eigen3 (Required is at least version "2.91.0") -- Log filtering: enabled -- Enabling boost::log library and DEBUG=OFF. Logging will work nicely, backtraces will not have debug info, files will be small. Loop on the following python versions and check available dependencies:3.8;3.7;3.6;3.5;3.4;3.3;3.2;3.1;3.0;2.7;2.6 -- Found PythonInterp: /usr/bin/python (found version "2.7.12") -- Found PythonInterp: /usr/bin/python3.5 (found version "3.5.2") Python version 3.5.2 found, try to import dependencies... -- Found NumPy: version "1.11.0" /usr/lib/python3/dist-packages/numpy/core/include -- Found IPython: /usr/lib/python3/dist-packages/IPython -- Found matplotlib: /usr/lib/python3/dist-packages/matplotlib -- Found pygraphviz: /usr/lib/python3/dist-packages/pygraphviz -- Found Xlib: /usr/lib/python3/dist-packages/Xlib -- Found minieigen: /usr/lib/python3/dist-packages/minieigen.cpython-35m-x86_64-linux-gnu.so -- Could NOT find future (missing: PY_future) Failed to import dependencies for Python version 3.5.2. NOT FOUND:future -- Found PythonInterp: /usr/bin/python (found version "2.7.12") -- Found PythonInterp: /usr/bin/python2.7 (found version "2.7.12") Python version 2.7.12 found, try to import dependencies... -- Found NumPy: version "1.11.0" /usr/lib/python2.7/dist-packages/numpy/core/include -- Found IPython: /usr/lib/python2.7/dist-packages/IPython -- Found matplotlib: /usr/lib/python2.7/dist-packages/matplotlib -- Found pygraphviz: /usr/lib/python2.7/dist-packages/pygraphviz -- Found Xlib: /usr/lib/python2.7/dist-packages/Xlib -- Found minieigen: /usr/lib/python2.7/dist-packages/minieigen.so -- Found future: /usr/lib/python2.7/dist-packages/future -- Found past: /usr/lib/python2.7/dist-packages/past -- Found Tkinter: /usr/lib/python2.7/lib-tk/Tkinter.pyc -- Boost_VERSION: 105800 -- Boost_LIB_VERSION: 1_58 -- Boost_INCLUDE_DIRS: /usr/include -- Boost_LIBRARIES: /usr/lib/x86_64-linux-gnu/libboost_python-py27.so/usr/lib/x86_64-linux-gnu/libboost_thread.so/usr/lib/x86_64-linux-gnu/libboost_filesystem.so/usr/lib/x86_64-linux-gnu/libboost_iostreams.so/usr/lib/x86_64-linux-gnu/libboost_regex.so/usr/lib/x86_64-linux-gnu/libboost_serialization.so/usr/lib/x86_64-linux-gnu/libboost_system.so/usr/lib/x86_64-linux-gnu/libboost_date_time.so/usr/lib/x86_64-linux-gnu/libboost_log.so/usr/lib/x86_64-linux-gnu/libboost_chrono.so/usr/lib/x86_64-linux-gnu/libboost_atomic.so/usr/lib/x86_64-linux-gnu/libboost_log_setup.so/usr/lib/x86_64-linux-gnu/libpthread.so Found all python dependencies with version 2.7.12, will compile yade with that. -- Chosen compiler flags are: CMAKE_CXX_FLAGS = -fPIC -O2 --param=ssp-buffer-size=4 -Werror -Wformat -Wformat-security -Wformat-nonliteral -Wall -Wextra -Wnarrowing -Wreturn-type -Wuninitialized -Wfloat-conversion -Wcast-align -Wdisabled-optimization -Wtrampolines -Wpointer-arith -Wswitch-bool -Wwrite-strings -Wnon-virtual-dtor -Wno-error=maybe-uninitialized -Wno-comment -Wno-float-conversion -Wno-unused-function -Wno-error=cpp -fdce -- Found Loki: /usr/include -- Found BZip2: /usr/lib/x86_64-linux-gnu/libbz2.so (found version "1.0.6") -- Looking for BZ2_bzCompressInit -- Looking for BZ2_bzCompressInit - found -- Found ZLIB: /usr/lib/x86_64-linux-gnu/libz.so (found version "1.2.8") -- Found Eigen3, version: 3.2.92 -- Disable vectorization -- The imported target "vtkRenderingPythonTkWidgets" references the file "/usr/lib/x86_64-linux-gnu/libvtkRenderingPythonTkWidgets.so" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/cmake/vtk-6.2/VTKTargets.cmake" but not all the files it references. -- The imported target "vtk" references the file "/usr/bin/vtk" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/cmake/vtk-6.2/VTKTargets.cmake" but not all the files it references. -- Found VTK -- Try OpenMP C flag = [-fopenmp] -- Performing Test OpenMP_FLAG_DETECTED -- Performing Test OpenMP_FLAG_DETECTED - Success -- Try OpenMP CXX flag = [-fopenmp] -- Performing Test OpenMP_FLAG_DETECTED -- Performing Test OpenMP_FLAG_DETECTED - Success -- Found OpenMP: -fopenmp -- Found OpenMP -- GTS using gts-config /usr/bin/gts-config -- Using GTS from /usr -- Found PkgConfig: /usr/bin/pkg-config (found version "0.29.1") -- Checking for one of the modules 'glib-2.0' -- Found GLib2: glib-2.0 /usr/include/glib-2.0;/usr/lib/x86_64-linux-gnu/glib-2.0/include -- Looking for include file glib/gregex.h -- Looking for include file glib/gregex.h - not found -- Found GTS -- Found OpenGL: /usr/lib/x86_64-linux-gnu/libGL.so -- Found GLUT: /usr/lib/x86_64-linux-gnu/libglut.so -- USE QT5 -- Found QGLVIEWER-qt5: /usr/include/QGLViewer -- Found GUI-Qt5-LIBS -- GMP libs: /usr/lib/x86_64-linux-gnu/libgmp.so /usr/lib/x86_64-linux-gnu/libgmpxx.so -- Found GMP: /usr/include/x86_64-linux-gnu -- Found CGAL: /usr/include, /usr/lib/x86_64-linux-gnu/libCGAL.so -- GMP libs: /usr/lib/x86_64-linux-gnu/libgmp.so /usr/lib/x86_64-linux-gnu/libgmpxx.so -- Found CGAL -- Using typical suitesparse path /usr -- SuiteSparse version 4.4.6 found, CHOLMOD direct solver for CPU activated. -- Found Cholmod: /usr/lib/x86_64-linux-gnu/libcholmod.so -- Found OpenBlas: /usr/lib/libopenblas.so -- BLAS_INCLUDE_DIR=/usr/include/openblas -- Found Metis: /usr/include -- Found Cholmod in /usr/lib/x86_64-linux-gnu/libcholmod.so -- Found OpenBlas in /usr/lib/libopenblas.so -- Found Metis in /usr/lib/x86_64-linux-gnu/libmetis.so -- Found MPI_C: /usr/lib/openmpi/lib/libmpi.so -- Found MPI_CXX: /usr/lib/openmpi/lib/libmpi_cxx.so;/usr/lib/openmpi/lib/libmpi.so -- Found MPI4PY: /usr/lib/python2.7/dist-packages/mpi4py/include -- MPI found -- Found GL2PS: /usr/lib/libgl2ps.so -- Found GL2PS LBMFLOW is still experimental, building and running LBM engine are at your own risk! -- BLAS_INCLUDE_DIR=/usr/include/openblas -- Looking for sgemm_ -- Looking for sgemm_ - found -- Found Threads: TRUE -- A library with BLAS API found. -- Looking for cheev_ -- Looking for cheev_ - found -- A library with LAPACK API found. -- Found OpenBlas -- Found Lapack -- CLP not found. -- BLAS_INCLUDE_DIR=/usr/include/openblas -- A library with BLAS API found. -- A library with LAPACK API found. -- CLP NOT found -- md5sum of freegult /usr/include/GL/freeglut_std.h is: 791a2febd8584ec530cdd7676191b6d5 -- freegult version is 2.8.1 Yade will be installed to /media/scholtes/sdb/yade/sources/trunk/install -- Suffix is set to -2019-11-05.git-35899c7 -- LIBRARY_OUTPUT_PATH is set to lib/x86_64-linux-gnu -- runtimePREFIX is set to /media/scholtes/sdb/yade/sources/trunk/install -- Found gts: /usr/lib/python2.7/dist-packages/gts -- Use system gts version -- VTK version >5 and <8 is found -- =========================================================== -- Yade configured with following features: BoostLog Odeint VTK OpenMP GTS GUI-Qt5 CGAL PFVFLOW PFVFLOW LINSOLV MPI TWOPHASEFLOW FEMLIKE GL2PS LBMFLOW THERMAL PotentialParticles -- Disabled features: CHOLMOD_GPU SPH DEFORM LIQMIGRATION MASK_ARBITRARY PROFILING PotentialBlocks -- Using MAX_LOG_LEVEL=5, ENABLE_LOGGER=ON -- Optimized build -- =========================================================== -- Configuring done -- Generating done -- Build files have been written to: /media/scholtes/sdb/yade/sources/trunk/build Any suggestion? Thanks Luc You received this question notification because your team yade-users is an answer contact for Yade. _______________________________________________ Mailing list: https://launchpad.net/~yade-users Post to : yade-users@lists.launchpad.net Unsubscribe : https://launchpad.net/~yade-users More help : https://help.launchpad.net/ListHelp