On Fri, Apr 19, 2019 at 7:20 PM Anne Schilling <anne1.schill...@gmail.com> wrote: > > Thank you all for your suggestions! Dima's suggestion did not seem to fix my > problem. > I did pull from develop again and now the elliptic problem is gone. But the > pillow problem > is still there:
do you actually have /usr/lib/system/libsystem_darwin.dylib on your system? I suspect it must be present, or else it > > [sagelib-8.8.beta3] byte-compiling > /Applications/sage/local/lib/python2.7/site-packages/sage_setup/optional_extension.py > to optional_extension.pyc > [sagelib-8.8.beta3] byte-compiling > /Applications/sage/local/lib/python2.7/site-packages/sage_setup/util.py to > util.pyc > [sagelib-8.8.beta3] running install_egg_info > [sagelib-8.8.beta3] Writing > /Applications/sage/local/lib/python2.7/site-packages/sage-8.8.beta3-py2.7.egg-info > [sagelib-8.8.beta3] Cleaning up stale installed files.... > [sagelib-8.8.beta3] - cleaning > /Applications/sage/local/lib/python2.7/site-packages > [sagelib-8.8.beta3] - cleaning build/lib.macosx-10.9-x86_64-2.7 > [sagelib-8.8.beta3] Finished cleaning, time: 0.22 seconds. > [sagelib-8.8.beta3] if [ "$UNAME" = "CYGWIN" ]; then \ > [sagelib-8.8.beta3] sage-rebase.sh "$SAGE_LOCAL" 2>/dev/null; > \ > [sagelib-8.8.beta3] fi > [sagelib-8.8.beta3] > [sagelib-8.8.beta3] real 8m42.417s > [sagelib-8.8.beta3] user 31m53.513s > [sagelib-8.8.beta3] sys 0m58.010s > make[2]: *** [all-start] Error 2 > > real 8m42.712s > user 32m26.636s > sys 1m9.140s > *************************************************************** > Error building Sage. > > The following package(s) may have failed to build (not necessarily > during this run of 'make all-start'): > > * package: pillow-5.3.0.p0 > log file: /Applications/sage/logs/pkgs/pillow-5.3.0.p0.log > build directory: /Applications/sage/local/var/tmp/sage/build/pillow-5.3.0.p0 > > The build directory may contain configuration files and other potentially > helpful information. WARNING: if you now run 'make' again, the build > directory will, by default, be deleted. Set the environment variable > SAGE_KEEP_BUILT_SPKGS to 'yes' to prevent this. > > make[1]: *** [all-start] Error 1 > make: *** [all] Error 2 > > https://www.math.ucdavis.edu/~anne/pillow-5.3.0.p0.log What is the output of otool -L /usr/lib/libSystem.B.dylib On my OSX 10.14 system it includes /usr/lib/system/libsystem_darwin.dylib (libSystem.B.dylib is a very important system library...) Is /usr/lib/system/libsystem_darwin.dylib present on your system? If not, then you might need to reinstall your OS, or find this file somewhere... If yes, then it's not found by your ld, so you need to fix this somehow. Probably something like sudo update_dyld_shared_cache HTH Dima Dima > > Best, > > Anne > > On Friday, April 19, 2019 at 9:26:34 AM UTC-7, E. Madison Bray wrote: >> >> On Fri, Apr 19, 2019 at 8:30 AM Dima Pasechnik <dim...@gmail.com> wrote: >> > >> > On Fri, Apr 19, 2019 at 7:33 AM Anne Schilling >> > <anne1.s...@gmail.com> wrote: >> > > >> > > This was after I ran 'make distclean'. You can view the logs here: >> > > >> > > https://www.math.ucdavis.edu/~anne/elliptic_curves-0.8.p0.log >> > >> > ImportError: No module named _sqlite3 >> > >> > This look like a silent failure in building sqlite3, which is a >> > standard package. >> >> I guess, besides the toolchain issue, it looks like having a working >> _sqlite3 module is a dependency of the elliptic_curves package >> install. >> >> In light of https://trac.sagemath.org/ticket/26899 we discussed at >> some point adding zlib to the list of extension modules that Python >> absolutely must build successfully. But it seems that never got done. >> I've opened a ticket for this and mentioned adding _sqlite3 to the >> list as well: https://trac.sagemath.org/ticket/27705 >> >> This would not immediately solve the problem Anne had but at least >> the root of the problem would be caught earlier. Then, hopefully, the >> solution Dima mentioned should work. This seems to be more-or-less >> the same problem as with zlib, and XCode no longer including standard >> headers in /usr/include by default. >> >> >> >> > > https://www.math.ucdavis.edu/~anne/pillow-5.3.0.p0.log >> > this looks like a problem with your toolchain >> > >> > ld: file not found: /usr/lib/system/libsystem_darwin.dylib for >> > architecture x86_64 >> > >> > discussed e.g. on >> > https://github.com/Homebrew/homebrew-php/issues/4590 >> > this and other similar places suggest to do >> > >> > sudo xcode-select -s /Library/Developer/CommandLineTools >> > >> > HTH >> > Dima >> > >> > >> > > >> > > Anne >> > > >> > > On Thursday, April 18, 2019 at 10:07:28 PM UTC-7, Dima Pasechnik wrote: >> > >> >> > >> How about posting logs of packages that failed to build? >> > >> >> > >> It would also be great to know whether it was a build from scratch. >> > >> >> > >> On Fri, 19 Apr 2019 07:03 Anne Schilling, <anne1.s...@gmail.com> wrote: >> > >>> >> > >>> Hi! >> > >>> >> > >>> I have trouble compiling the latest development version of Sage on >> > >>> MacOS 10.12.6: >> > >>> >> > >>> al/share/icons/hicolor/64x64/mimetypes >> > >>> [giac-1.5.0.37.p1] mkdir >> > >>> /Applications/sage/local/var/tmp/sage/build/giac-1.5.0.37.p1/inst/Applications/sage/local/share/icons/hicolor/32x32/mimetypes >> > >>> [giac-1.5.0.37.p1] mkdir >> > >>> /Applications/sage/local/var/tmp/sage/build/giac-1.5.0.37.p1/inst/Applications/sage/local/share/icons/hicolor/16x16/mimetypes >> > >>> [giac-1.5.0.37.p1] >> > >>> [giac-1.5.0.37.p1] real 7m58.316s >> > >>> [giac-1.5.0.37.p1] user 24m11.636s >> > >>> [giac-1.5.0.37.p1] sys 0m54.736s >> > >>> [giac-1.5.0.37.p1] Copying package files from temporary location >> > >>> /Applications/sage/local/var/tmp/sage/build/giac-1.5.0.37.p1/inst to >> > >>> /Applications/sage/local >> > >>> [giac-1.5.0.37.p1] Successfully installed giac-1.5.0.37.p1 >> > >>> [giac-1.5.0.37.p1] Deleting temporary build directory >> > >>> [giac-1.5.0.37.p1] >> > >>> /Applications/sage/local/var/tmp/sage/build/giac-1.5.0.37.p1 >> > >>> [giac-1.5.0.37.p1] Finished installing giac-1.5.0.37.p1.spkg >> > >>> make[2]: *** [all-start] Error 2 >> > >>> >> > >>> real 9m56.979s >> > >>> user 33m21.853s >> > >>> sys 2m8.502s >> > >>> *************************************************************** >> > >>> Error building Sage. >> > >>> >> > >>> The following package(s) may have failed to build (not necessarily >> > >>> during this run of 'make all-start'): >> > >>> >> > >>> * package: elliptic_curves-0.8.p0 >> > >>> log file: /Applications/sage/logs/pkgs/elliptic_curves-0.8.p0.log >> > >>> build directory: >> > >>> /Applications/sage/local/var/tmp/sage/build/elliptic_curves-0.8.p0 >> > >>> >> > >>> * package: pillow-5.3.0.p0 >> > >>> log file: /Applications/sage/logs/pkgs/pillow-5.3.0.p0.log >> > >>> build directory: >> > >>> /Applications/sage/local/var/tmp/sage/build/pillow-5.3.0.p0 >> > >>> >> > >>> The build directory may contain configuration files and other >> > >>> potentially >> > >>> helpful information. WARNING: if you now run 'make' again, the build >> > >>> directory will, by default, be deleted. Set the environment variable >> > >>> SAGE_KEEP_BUILT_SPKGS to 'yes' to prevent this. >> > >>> >> > >>> make[1]: *** [all-start] Error 1 >> > >>> make: *** [all] Error 2 >> > >>> >> > >>> Does anyone know why? >> > >>> >> > >>> Thank you, >> > >>> >> > >>> Anne >> > >>> >> > >>> -- >> > >>> You received this message because you are subscribed to the Google >> > >>> Groups "sage-devel" group. >> > >>> To unsubscribe from this group and stop receiving emails from it, send >> > >>> an email to sage-...@googlegroups.com. >> > >>> To post to this group, send email to sage-...@googlegroups.com. >> > >>> Visit this group at https://groups.google.com/group/sage-devel. >> > >>> For more options, visit https://groups.google.com/d/optout. >> > > >> > > -- >> > > You received this message because you are subscribed to the Google >> > > Groups "sage-devel" group. >> > > To unsubscribe from this group and stop receiving emails from it, send >> > > an email to sage-...@googlegroups.com. >> > > To post to this group, send email to sage-...@googlegroups.com. >> > > Visit this group at https://groups.google.com/group/sage-devel. >> > > For more options, visit https://groups.google.com/d/optout. >> > >> > -- >> > You received this message because you are subscribed to the Google Groups >> > "sage-devel" group. >> > To unsubscribe from this group and stop receiving emails from it, send an >> > email to sage-...@googlegroups.com. >> > To post to this group, send email to sage-...@googlegroups.com. >> > Visit this group at https://groups.google.com/group/sage-devel. >> > For more options, visit https://groups.google.com/d/optout. > > -- > You received this message because you are subscribed to the Google Groups > "sage-devel" group. > To unsubscribe from this group and stop receiving emails from it, send an > email to sage-devel+unsubscr...@googlegroups.com. > To post to this group, send email to sage-devel@googlegroups.com. > Visit this group at https://groups.google.com/group/sage-devel. > For more options, visit https://groups.google.com/d/optout. -- You received this message because you are subscribed to the Google Groups "sage-devel" group. 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