Bug#1070746: Bug#1065309: transition: gnat (12 -> 13 + time_t64)

2024-05-08 Thread Rafael Laboissière
* Graham Inggs [2024-05-08 10:25]: It looks like the last blocker for this transition is plplot 5.15.0+dfsg2-10 failing its own autopkgtests [1]. I will soon upload version 5.15.0+dfsg2-11, with the fix proposed by Nicolas in Bug#1070746. Best, Rafael -- debian-science-maintainers

Bug#1062613: librsb: NMU diff for 64-bit time_t transition

2024-02-04 Thread Rafael Laboissière
Hello Steve, * Rafael Laboissière [2024-02-02 18:19]: Control: tags -1 - upstream * Steve Langasek [2024-02-02 08:48]: On Fri, Feb 02, 2024 at 02:06:38PM +0100, Rafael Laboissière wrote: Control: tags -1 + upstream Thanks for this bug report and for the upload to experimental, Steve

Bug#1062613: librsb: NMU diff for 64-bit time_t transition

2024-02-02 Thread Rafael Laboissière
Control: tags -1 - upstream * Steve Langasek [2024-02-02 08:48]: On Fri, Feb 02, 2024 at 02:06:38PM +0100, Rafael Laboissière wrote: Control: tags -1 + upstream Thanks for this bug report and for the upload to experimental, Steve. I am hereby forwarding your message to the upstream

Bug#1062613: librsb: NMU diff for 64-bit time_t transition

2024-02-02 Thread Rafael Laboissière
Control: tags -1 + upstream Thanks for this bug report and for the upload to experimental, Steve. I am hereby forwarding your message to the upstream author. Best, Rafael Laboissière * Steve Langasek [2024-02-02 06:09]: Source: librsb Version: 1.3.0.2+dfsg-6 Severity: serious Tags

Bug#1055228: Bug#1055750: Bug#1055228: plplot: FTBFS on armhf (test segfault)

2024-01-20 Thread Rafael Laboissière
* Emanuele Rocca [2024-01-17 16:22]: as a workaround for this issue, you could disable stack-clash-protection when building for armhf. The following snippet in debian/rules should do the trick: ifeq ($(DEB_TARGET_ARCH),armhf) DEB_BUILD_MAINT_OPTIONS = hardening=+all,-stackclash else

Bug#1055228: Bug#1055750: Bug#1055228: plplot: FTBFS on armhf (test segfault)

2024-01-01 Thread Rafael Laboissière
Control: severity -1 important * Sebastiaan Couwenberg [2024-01-01 20:13]: plplot got removed from armhf, the severity of this issue could be lowered to important to not have the package removed from testing. Thanks, I am doing it hereby. Best, Rafael Laboissière -- debian-science

Bug#1055228: Processed (with 1 error): Re: Bug#1055750: Bug#1055228: plplot: FTBFS on armhf (test segfault)

2023-11-21 Thread Rafael Laboissière
severity 1055750 serious merge 1055750 1055228 -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers

Bug#1055228: Bug#1055750: Bug#1055228: plplot: FTBFS on armhf (test segfault)

2023-11-21 Thread Rafael Laboissière
have any reasons to believe the compiler is at fault really. Thanks for the suggestion, Emanuele. I am hereby merging both bugs, which are now both assigned to plplot. Best, Rafael Laboissière -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https

Bug#1055228: plplot: FTBFS on armhf (test segfault)

2023-11-10 Thread Rafael Laboissière
* Rafael Laboissière [2023-11-09 17:11]: [snip] There may be a programming error in x09f.f90 or this may be a problem with gfortran on armhf. My knowledge of Fortran is almost non existent and I will need the help of experts, in order to fix the issue. Regarding this issue, I filed a bug

Bug#1055228: plplot: FTBFS on armhf (test segfault)

2023-11-09 Thread Rafael Laboissière
m with gfortran on armhf. My knowledge of Fortran is almost non existent and I will need the help of experts, in order to fix the issue. Best, Rafael Laboissière [1] https://git.dpkg.org/cgit/dpkg/dpkg.git/diff/?id=1d46b351f [2] https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1054583 -- debian

Bug#1053314: Depends: python3-h5py-mpi without python3-h5py

2023-10-10 Thread Rafael Laboissière
* Rafael Laboissière [2023-10-09 08:30]: […] At least, I hope that version 3.1.0+dfsg2-5 will really fix Bug#1053314 and the h5py transition will be completed. Unfortunately, it is still not working: https://ci.debian.net/data/autopkgtest/testing/arm64/x/xmds2/38836874/log.gz I guess

Bug#1053314: Depends: python3-h5py-mpi without python3-h5py

2023-10-09 Thread Rafael Laboissière
not found. On the other hand maybe that just hides the real problem, that h5py-serial was not installed when actually it was wanted after all. The ImportError correctly identifies that case. On 2023-10-08 17:38, Nilesh Patra wrote: Hello, On 10/8/23 17:22, Rafael Laboissière wrote: Ok, I tr

Bug#1053314: Depends: python3-h5py-mpi without python3-h5py

2023-10-08 Thread Rafael Laboissière
rial' from partially initialized module 'h5py' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/__init__.py) Is there a way to force h5py to import _debian_h5py_serial instead of _debian_h5py_mpi, via the generic h5py namespace? Best, Rafael * Rafael Laboissière [2023-10-0

Bug#1053314: Depends: python3-h5py-mpi without python3-h5py

2023-10-08 Thread Rafael Laboissière
* Nilesh Patra [2023-10-04 02:24]: On Sun, 01 Oct 2023 15:25:43 +0200 Drew Parsons wrote: Package: xmds2 Version: 3.1.0+dfsg2-4 Severity: serious Justification: debci xmds2 Depends: python3-h5py-mpi without depending on python3-h5py python3-h5py-mpi only provides the h5py._debian_h5py_mpi

Bug#1037988: vlfeat: FTBFS when graphicsmagick-imagemagick-compat is installed and imagemagick is not

2023-06-15 Thread Rafael Laboissière
agick-compat" is necessary for fixing the issue. Best, Rafael Laboissière -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers

Bug#1035652: unblock: plplot/5.15.0+dfsg2-6

2023-05-07 Thread Rafael Laboissière
Best, Rafael Laboissière diff -Nru plplot-5.15.0+dfsg2/debian/changelog plplot-5.15.0+dfsg2/debian/changelog --- plplot-5.15.0+dfsg2/debian/changelog 2023-01-07 17:42:41.0 -0300 +++ plplot-5.15.0+dfsg2/debian/changelog 2023-04-28 06:34:58.0 -0300 @@ -1,3 +1,10 @@ +plplot (5.15.0

Bug#1016332: librsb: FTBFS: gmake[3]: *** [Makefile:920: qtests] Error 1

2022-12-06 Thread Rafael Laboissière
* Michele Martone [2022-12-05 15:31]: In my 20221204@23:42 (yesterday) email I forgot to add that on my chroot setup, I can reproduce latex failing to compile the file I was attaching. In that setup I have a utf8x.def too, sized 8036 bytes and with md5sum 21f7ac37aafb6cfeddbb196b8bfd6280 .

Bug#1016332: librsb: FTBFS: gmake[3]: *** [Makefile:920: qtests] Error 1

2022-12-05 Thread Rafael Laboissière
* Michele Martone [2022-12-04 23:42]: latex is not able to compile a rsbtest-generated file looking like the one I attach. The problematic line is: \usepackage[utf8x]{inputenc} [...] It compiles fine here: $ pdflatex test.tex > /dev/null && grep utf8x.def test.log

Bug#1016332: librsb: FTBFS: gmake[3]: *** [Makefile:920: qtests] Error 1

2022-12-04 Thread Rafael Laboissière
Control: forwarded -1 michelemart...@users.sourceforge.net Control: tags -1 unreproducible Hi Michele, There is a bug report filed against the librsb package (Bug#1016332 [1]) that has severity level "serious". This is blocking the package entering testing and, therefore, librsb will be

Bug#1006682: /usr/lib/cmake/mathgl2/MathGL2Config.cmake: Could NOT find OpenMP_CXX

2022-09-01 Thread Rafael Laboissière
with leaving things as is. And maybe it's the upstream MathGL2Config.cmake that needs a rework to deal more easily with various setups. I am not sure whether the issue can be fixed in a trivial way. I am hereby tagging this bug report "wontfix", for now. Best, Rafael Laboissière -- debi

Bug#1006682: /usr/lib/cmake/mathgl2/MathGL2Config.cmake: Could NOT find OpenMP_CXX

2022-08-30 Thread Rafael Laboissière
. Installing libomp-dev fixes the issue though I'm not sure this is the correct package to depend on. Thank you for the bug report. Could you please provide an example that trigger the bug? For inspiration, look at Bug #1004218 [1] or #1004219 [2]. Best, Rafael Laboissière [1] https://bugs.debian.org

Bug#990397: fixed in version 5.15.0+dfsg-21

2021-07-12 Thread Rafael Laboissière
Laboissière * Rafael Laboissière [2021-07-07 15:35]: Control: reopen -1 5.15.0+dfsg-21 I am hereby indicating that this bug is fixed in version reopening 5.15.0+dfsg-21, which is in experimental. Rafael Laboissière -- debian-science-maintainers mailing list debian-science-maintainers@alioth

Bug#964127: fixed in 5.15.0+dfsg-20

2021-07-12 Thread Rafael Laboissière
Control: fixed -1 5.15.0+dfsg-20 This bug is fixed in experimental and will be in unstable after the bullseye release. Rafael Laboissière -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo

Bug#990397: fixed in version 5.15.0+dfsg-21

2021-07-07 Thread Rafael Laboissière
Control: reopen -1 5.15.0+dfsg-21 I am hereby indicating that this bug is fixed in version reopening 5.15.0+dfsg-21, which is in experimental. Rafael Laboissière -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi

Bug#990397: What are the development priorities for the csironn library? (was Bug#990397: depends on deprecated qhull library)

2021-07-04 Thread Rafael Laboissière
* Alan W. Irwin [2021-07-04 03:38]: A message on this thread from Atri Bhattacharya bounced (presumably because he used a non-subscription return address). But as list administrator I saw that bounced message which turned out to be of immediate interest. So I am reposting it here without

Bug#990397: Reopen Bug#990397, fixed in experimental

2021-07-04 Thread Rafael Laboissière
Control: reopen -1 Control: tags -1 + fixed-in-experimental I am hereby reopening this bug report and tagging it accordingly. The fixed version was uploaded to experimental and the version currently in sid and testing is impacted by the bug. Rafael Laboissière -- debian-science-maintainers

Bug#990397: depends on deprecated qhull library

2021-07-02 Thread Rafael Laboissière
and including libqull_r/qhull_ra.h instead of libqull/qhull_a.h [2], and should be done by the upstream authors. Best, Rafael Laboissière [1] https://bugs.debian.org/990397 [2] http://www.qhull.org/html/qh-code.htm#convert * Timo Röhling [2021-06-28 10:47]: Package: src:plplot Version

Bug#990397: depends on deprecated qhull library

2021-06-30 Thread Rafael Laboissière
libqhull_r.so instead of libqhull.so and including libqull_r/qhull_ra.h instead of libqull/qhull_a.h [2], and should be done by the upstream authors. Best, Rafael Laboissière [1] https://bugs.debian.org/990397 [2] http://www.qhull.org/html/qh-code.htm#convert * Timo Röhling [2021-06-28 10:47

Bug#964127: marked as done (plplot: Please switch from sip4 to sip5)

2021-06-19 Thread Rafael Laboissière
Control: reopen -1 Control: tags -1 + fixed-in-experimental I am hereby reopening this bug report and tagging it accordingly. The fixed version was uploaded to experimental and the version currently in sid and testing is impacted by the bug. Rafael Laboissière -- debian-science-maintainers

Bug#964127: plplot: Please switch from sip4 to sip5

2020-12-01 Thread Rafael Laboissière
* Dmitry Shachnev [2020-11-30 18:50]: On Mon, Nov 30, 2020 at 02:25:43PM +0100, Rafael Laboissière wrote: I have here: $ dpkg -l pyqt5-dev | grep ^ii ii pyqt5-dev 5.15.1+dfsg-2 all Development files for PyQt5 $ grep module-tags /usr/lib/python3/dist-packages

Bug#964127: plplot: Please switch from sip4 to sip5

2020-11-30 Thread Rafael Laboissière
Control: forwarded -1 https://sourceforge.net/p/plplot/mailman/message/37165423/ Control: tags -1 + upstream * Dmitry Shachnev [2020-11-30 18:50]: On Mon, Nov 30, 2020 at 02:25:43PM +0100, Rafael Laboissière wrote: This is something that must be done upstream, isn't it? As a Debian

Bug#964127: plplot: Please switch from sip4 to sip5

2020-11-30 Thread Rafael Laboissière
* Dmitry Shachnev [2020-11-30 13:52]: On Mon, Nov 30, 2020 at 09:32:06AM +0100, Rafael Laboissière wrote: The following succeeds: cd /obj-x86_64-linux-gnu/bindings/qt_gui/pyqt5 && /usr/bin/sip5 -c . -I/usr/lib/python3/dist-packages/PyQt5/bindings -n PyQt5.sip -t Qt_5_14_0 -

Bug#964127: plplot: Please switch from sip4 to sip5

2020-11-30 Thread Rafael Laboissière
A further comment on my last message: * Rafael Laboissière [2020-11-29 13:40]: Building in a clean unstable chroot fails with this error message: cd /obj-x86_64-linux-gnu/bindings/qt_gui/pyqt5 && /usr/bin/sip5 -c . -I/usr/lib/python3/dist-packages/PyQt5/bindings -n PyQt5.sip -t Q

Bug#964127: plplot: Please switch from sip4 to sip5

2020-11-29 Thread Rafael Laboissière
Control: tags -1 + help * Dmitry Shachnev [2020-07-02 13:31]: Source: plplot Version: 5.15.0+dfsg-12 Severity: important Usertags: sip5 Dear Maintainer, Recently I have updated pyqt5 and related packages to use sip5 instead of sip4 for build. This is in experimental for now, but I want to

Bug#975007: src:xmds2: autopkgtest times out on ppc64el (and sometimes on amd64)

2020-11-18 Thread Rafael Laboissière
numerical computation of complicated problems (partial differential equations), running the whole set of tests takes usually a lot of time. The only way the timeout issue can be fixed is by preventing some test from being run. I will take a look at this, as time permits. Best, Rafael

Bug#946986: python3-h5py: h5py does not play nicely with subprocess and mpirun

2020-01-24 Thread Rafael Laboissière
* Drew Parsons [2020-01-23 19:02]: On 2020-01-23 18:15, Thibaut Paumard wrote: Hi, Le 22/01/2020 à 16:49, Drew Parsons a écrit : Might be worth bringing to the attention of the subprocess developers. I figure they'll either be interested to know about the problem or will have a simple

Bug#946986: python3-h5py: h5py does not play nicely with subprocess and mpirun

2020-01-23 Thread Rafael Laboissière
Control: forwarded -1 https://github.com/h5py/h5py/issues/1467 * Drew Parsons [2020-01-22 23:49]: On 2020-01-22 20:19, Rafael Laboissière wrote: * Drew Parsons [2020-01-15 22:25]: This is one very strange bug. Why would the mere fact that h5py is loaded affect what subprocess does? Yes

Bug#946986: python3-h5py: h5py does not play nicely with subprocess and mpirun

2020-01-22 Thread Rafael Laboissière
* Drew Parsons [2020-01-15 22:25]: This is one very strange bug. Why would the mere fact that h5py is loaded affect what subprocess does? Yes, this is completely mysterious. However, the bug is real. It is probably an upstream problem. I would love to forward the present report

Bug#948167: plplot: autopkgtest regression on arm64: /usr/lib/x86_64-linux-gnu/libm.so: No such file or directory

2020-01-05 Thread Rafael Laboissière
Control: tags -1 pending * Rafael Laboissière [2020-01-05 15:28]: 1) The package will have to go through the NEW queue after upload, because of the new binary package. Indeed: https://ftp-master.debian.org/new/plplot_5.15.0+dfsg-10+gnat8+1.html I am hereby tagging this bug report

Bug#948167: plplot: autopkgtest regression on arm64: /usr/lib/x86_64-linux-gnu/libm.so: No such file or directory

2020-01-05 Thread Rafael Laboissière
* Rafael Laboissière [2020-01-05 15:28]: 3) Since 5.15.0+dfsg-11 has been already uploaded to experimental, that version cannot be used for uploading to unstable. I will use the versioning scheme 5.15.0+dfsg-10+unstable1, unless you have any objections. I changed my mind. I just uploaded

Bug#948167: plplot: autopkgtest regression on arm64: /usr/lib/x86_64-linux-gnu/libm.so: No such file or directory

2020-01-05 Thread Rafael Laboissière
Control: tags -1 confirmed * Ole Streicher [2020-01-05 14:19]: On 05.01.20 10:32, Rafael Laboissière wrote: A "simple" solution would be to create a new package plplot-examples, with Arch:any, containing the examples/ directory that is currently in /usr/share/doc/plplot-doc/. @

Bug#948167: plplot: autopkgtest regression on arm64: /usr/lib/x86_64-linux-gnu/libm.so: No such file or directory

2020-01-05 Thread Rafael Laboissière
t-examples, with Arch:any, containing the examples/ directory that is currently in /usr/share/doc/plplot-doc/. @Ole: would you agree with this change? Best, Rafael Laboissière [1] https://salsa.debian.org/science-team/plplot/commit/d8ce3ed802eccecef8583d03a25712069f0643d2 -- debian-science-m

Bug#946986: python3-h5py: h5py does not play nicely with subprocess and mpirun

2019-12-18 Thread Rafael Laboissière
Package: python3-h5py Version: 2.10.0-2+b1 Severity: important Control: block 938925 by -1 In the version of python3-h5py currently in testing/unstable, the importation of module h5py causes malfunction of Python scripts which use subprocess to run a command through mpirun. The ZIP file

Bug#946400: plplot: please build the Ada binding with gnat-9

2019-12-09 Thread Rafael Laboissière
Thanks for your detailed reply, Nicolas. I must admit that my knowledge of ADA is almost inexistant. I even do not knew what ALI means, until I looked at the documentation. I do not have time to plunge deeper into this issue now. I have already committed all the patches that you submitted

Bug#946400: plplot: please build the Ada binding with gnat-9

2019-12-08 Thread Rafael Laboissière
the number "1"? Would it not be better to have both packages in sync, like libplplotadaN and libplplotadaN-dev? Please upload to experimental so that the new package(s) pass the NEW queue. Once all Ada packages are ready, we will reupload them to unstable. Okay. Best, Rafael Laboi

Bug#938925: xmds2: fails mpi hdf5 tests

2019-09-09 Thread Rafael Laboissière
autopkgtest failure is holding back h5py with mpi support from migrating to testing. Thanks for this bug report. I established a preliminary diagnostic of the problem and kept the upstream authors informed. Rafael Laboissière -- debian-science-maintainers mailing list debian-science

Bug#904669: xmds2: autopkgtest times out since 2018-07-19

2019-01-13 Thread Rafael Laboissière
The CI run succeeded for version 2.2.3+dfsg-12: https://ci.debian.net/data/autopkgtest/unstable/amd64/x/xmds2/1686325/log.gz Should the blacklist be lifted ? Rafael * Rafael Laboissière [2019-01-11 11:37]: Hi Paul, * Paul Gevers [2018-09-03 19:48]: On 03-09-18 09:51, Rafael Laboissière

Bug#904669: xmds2: autopkgtest times out since 2018-07-19

2019-01-11 Thread Rafael Laboissière
Hi Paul, * Paul Gevers [2018-09-03 19:48]: On 03-09-18 09:51, Rafael Laboissière wrote: Unfortunately, the autobuild failed [*].  It is certainly a problem related to MPI and it is very hard to debug.  I was convinced that I have fixed it in version 2.2.3+dfsg-11 of the package. I just

Bug#904669: xmds2: autopkgtest times out since 2018-07-19

2018-09-03 Thread Rafael Laboissière
Hi Paul, * Paul Gevers [2018-09-02 18:21]: Hi Rafael, On 02-09-18 18:10, Rafael Laboissière wrote: I just uploaded version 2.2.3+dfsg-11 of the xmds2 package to unstable. The time-out problem seems to be fixed in this version.  Could you please remove xmds2 from the blacklist to see what

Bug#904669: xmds2: autopkgtest times out since 2018-07-19

2018-09-02 Thread Rafael Laboissière
* Paul Gevers [2018-07-26 14:28]: Source: xmds2 Version: 2.2.3+dfsg-10 X-Debbugs-CC: debian...@lists.debian.org User: debian...@lists.debian.org Usertags: timeout Dear maintainers, Since 2018-07-19 the autopkgtest of your package times out (after 2:47h) on ci.debian.net. I have copied

Bug#903105: nlopt: FTBFS with to octave 4.4.0

2018-07-07 Thread Rafael Laboissière
* Andreas Tille [2018-07-06 10:59]: No idea whether Debian Octave Group is read by a human beeing. It is better to use the debian-octave mailing list for this kind of discussion. On Fri, Jul 06, 2018 at 09:59:46AM +0200, Andreas Tille wrote: Package: nlopt Severity: serious