in the topic, plus I use emacs in Linux so,
> I'm sorry if I can't help more. But for sure this will give you some
> starting point.
>
> https://www.emacswiki.org/emacs/ExecPath
>
> https://emacs.stackexchange.com/questions/64081/how-to-get-the-path-from-the-shell
>
> Good
Hi All,
I normally work in Emacs (28.2 build 2)) on Windows 11 pro as an admin user.
Quite a few of my analyses these days use Stan (via cmdstanr and the brms
package as example).
I upgraded R to 4.3.0 and Stan. Now, I am quite reliably getting crashes
where my R process terminates when using
Are the bugs something that could be helped if there was small funding for
a student internship?
If potentially useful, any of the ESS developers can contact me directly.
On Thu, Sep 23, 2021 at 3:53 AM Martin Maechler via ESS-help <
ess-help@r-project.org> wrote:
> > Lionel Henry via
I'm not sure I could present, but very interested in watching. I manage a
few packages and do it all in Emacs & ESS, but I don't think I take
advantage of ESS well, other than its automatic ability to run roxygen2
examples, and syntax highlighting. Happy to read and edit wikis and provide
Hi Jeremy,
I don't know about references, but this around. See for example:
http://afni.nimh.nih.gov/sscc/gangc/tr.html
the relevant line in cor.test is:
STATISTIC - c(t = sqrt(df) * r/sqrt(1 - r^2))
You can convert *t*s to *r*s and vice versa.
Best,
Josh
On Fri, Oct 17, 2014 at 10:32
Hi,
Perhaps still not as short as you want, but I normally use which():
p - c(1:10/100, NA, NaN)
p[which(p = .05)]
[1] 0.01 0.02 0.03 0.04 0.05
Cheers,
Josh
On Tue, Oct 14, 2014 at 8:51 PM, Rainer M Krug rai...@krugs.de wrote:
Hi
I want to evaluate NA and NaN to FALSE (for indexing) so
Hi Stephane,
This is the well known result of limitted floating point precision (e.g.,
http://www.validlab.com/goldberg/addendum.html). Using a test of
approximate rather than exact equality shows R yields the correct answer:
nperm - 1
Fperm - replicate(n=nperm, anova(lm(sample(Y) ~ F,
Hi Lucy,
Try the gamlss.dist package, specifically the rWEI2() function.
Cheers,
Josh
On Wed, Sep 3, 2014 at 11:52 AM, Lucy Leigh lucy.le...@newcastle.edu.au
wrote:
Hi,
I wish to simulate some data from a Weibull distribution. The rweibull
function in R uses the parameterisation
'with
On Wed, Aug 13, 2014 at 7:41 AM, Rolf Turner r.tur...@auckland.ac.nz
wrote:
On 13/08/14 07:57, Ron Michael wrote:
Hi,
I would need to get a clarification on a quite fundamental statistics
property, hope expeRts here would not mind if I post that here.
I leant that variance-covariance
On Sat, Aug 9, 2014 at 9:56 AM, Patrick Burns pbu...@pburns.seanet.com
wrote:
On 07/08/2014 07:21, Joshua Wiley wrote:
Hi Ryan,
It does work, but the *apply family of functions always pass to the first
argument, so you can specify e2 = , but not e1 =. For example:
sapply(1:3, ``, e2 = 2
Hi Ryan,
It does work, but the *apply family of functions always pass to the first
argument, so you can specify e2 = , but not e1 =. For example:
sapply(1:3, ``, e2 = 2)
[1] FALSE FALSE TRUE
From ?sapply
'lapply' returns a list of the same length as 'X', each element of
which is
On Thu, Jul 31, 2014 at 9:47 AM, Duncan Murdoch murdoch.dun...@gmail.com
wrote:
On 30/07/2014, 2:20 PM, Yihui Xie wrote:
As a reader, I often want to run the code by myself _while_ I'm
reading a particular part of an article/report. I find it convenient
to be able to copy the code as I'm
Hi Elizabeth,
In confirmatory factor analysis with multiple groups, the reason one needs
to estimate the models simultaneously is that, typically, one is interested
in applying constraints (e.g., forcing all or some of the factor loadings
to be equal across groups). In exploratory factor
,
Thank you very much. I knew that the scaling had to be adjusted, but was not
sure on how to do this.
Can you please show me how to do this scaling with `glm'? In other words, how
would I scale the deviance from glm?
Thanks,
Ravi
-Original Message-
From: Joshua Wiley
Hi Ravi,
Deviance is the SS in this case, but you need a normalizing constant
adjusted by the lambda to put them on the same scale. I modified your
example below to simplify slightly and use the normalization (see the
LL line).
Cheers,
Josh
##
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] Error 1
make[2]: *** [all] Error 2
make[1]: *** [R] Error 1
make: *** [all] Error 2
Em 04/10/2013 22:46, Cleber N.Borges escreveu:
bingo! :-)
I got one pass to advanced!
my TMP environment variable is:
%SystemRoot%\TEMP
thanks
cleber
Em 04/10/2013 22:02, Joshua Wiley escreveu
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# is the same as:
m1$model$Ozone
# Now solve for the parameter estimates:
solve(crossprod(X)) %*% crossprod(X,Y) #gives the correct answer
library(MASS)
ginv(t(X)%*%X)%*%t(X)%*%Y #gives a wrong answer
Am 03/09/2013 12:29, schrieb Joshua Wiley:
Hi Christoph,
Use this matrix expression instead
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non-missing level:
x - pmax(3*cg, 2*hs, es, 0, na.rm=TRUE)
rock chalk...
-nfultz
On Fri, Jun 07, 2013 at 06:24:50PM -0700, Joshua Wiley wrote:
Hi Paul,
Unless you have truly offended the data generating oracle*, the
pattern: NA, 1, NA, should be a data entry error --- graduating HS
On Thu, Jun 6, 2013 at 9:05 AM, William Dunlap wdun...@tibco.com wrote:
I said the force was 'required' in the sense that without it
the function will fail to do what you want in some situations.
With the Force on your side, functions always do what you want.
Bill Dunlap
Spotfire, TIBCO
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attachment: fit.png__
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commented, minimal, self-contained, reproducible code.
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, Mar 25, 2013 at 6:18 PM, Joshua Wiley jwiley.ps...@gmail.com
wrote:
Hi Antonio,
If wealth is a factor variable, you should include the main effect in
the model, as the smooths will be centered.
Cheers,
Josh
On Mon, Mar 25, 2013 at 6:09 PM, Antonio P. Ramos
ramos.grad.stud...@gmail.com
/
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Ph.D. Student, Health Psychology
Programmer Analyst II, Statistical Consulting Group
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.
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Realized I did not reply to this list.
On Sat, Jan 26, 2013 at 7:54 PM, Joshua Wiley jwiley.ps...@gmail.com wrote:
Hi Erin,
Most packages creating output for inclusion in pages, reports, books,
etc. do some rounding as R's default level of printed precision tends
to be overkill. R2HTML
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On Wed, Aug 29, 2012 at 3:56 AM, Milan Bouchet-Valat nalimi...@club.fr wrote:
Le mardi 21 août 2012 à 07:51 -0700, Joshua Wiley a écrit :
Hi Rainer,
You could try:
subs - expression(dead==FALSE recTreat==FALSE)
lme(formula, subset = eval(subs))
Not tested, but something along those
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on how to get around this limitation on
stackoverflow with helpful answers by Ben Bolker and Joshua Wiley:
http://stackoverflow.com/q/11335923/289572
(this functionality is now used in function mixed() in my new package afex
for obtaining type 3 p-values for mixed models)
With few exceptions
On Fri, Aug 10, 2012 at 9:16 AM, S Ellison s.elli...@lgcgroup.com wrote:
R in general tries hard to prohibit this behavior (i.e., including an
interaction but not the main effect). When removing a main effect and
leaving the interaction, the number of parameters is not reduced by
one (as
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In addition to Bert's suggestion of r sig mixed models (which I second), I
would encourage you to create a more detailed example and explanation of what
you hope to accomplish. Sounds a bit like an auto regressive structure, but
more details would be good.
Cheers,
Josh
On Aug 4, 2012, at
Hi Sacha,
You're right that this is not an R related question really (would be better
somewhere like crossvalidated.com).
If basically everyone catches 0/1 birds, then I would consider dichotomizing:
Y - as.integer(caught = 1)
then check cross tabs to make sure there are no zero cells
You may be able to get around zero cells using a an MCMC approach such as with
MCMCglmm.
On Aug 4, 2012, at 15:30, Sacha Viquerat dawa.ya.m...@googlemail.com wrote:
On 08/04/2012 07:57 PM, Joshua Wiley wrote:
Hi Sacha,
You're right that this is not an R related question really (would
and others may consider this an
overreaction of course.
Sorry for the rant, but it seems relevant to your close parsing of the thread.
-- Cheers,
Bert
On Wed, Aug 1, 2012 at 10:35 PM, Joshua Wiley jwiley.ps...@gmail.com wrote:
On Wed, Aug 1, 2012 at 10:28 PM, Bert Gunter gunter.ber...@gene.com
,
Xuan
-Original Message-
From: Bert Gunter [mailto:gunter.ber...@gene.com]
Sent: Thursday, August 02, 2012 9:42 AM
To: Joshua Wiley
Cc: Michael Weylandt; r-help@r-project.org; Xuan Zhao
Subject: Re: [R] How to link two R packages together
Josh:
You may be right ... but I still do
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My apologies. I stand corrected. Thanks Michael.
Josh
On Thu, Jul 19, 2012 at 10:29 PM, R. Michael Weylandt
michael.weyla...@gmail.com wrote:
See: https://stat.ethz.ch/pipermail/r-help/2012-February/303110.html
Michael
On Fri, Jul 20, 2012 at 12:19 AM, Joshua Wiley jwiley.ps...@gmail.com
-
From: r-help-boun...@r-project.org [mailto:r-help-bounces@r-
project.org] On Behalf Of Joshua Wiley
Sent: July-12-12 2:53 AM
To: r-help@r-project.org
Cc: John Fox
Subject: [R] easy way to fit saturated model in sem package?
Hi,
I am wondering if anyone knows of an easy way to fit
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, minimal, self-contained, reproducible code.
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plots.pdf
Description: Adobe PDF document
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PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
--
Joshua Wiley
Ph.D. Student, Health Psychology
Programmer
.
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R-help@r-project.org mailing list
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PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
--
Joshua Wiley
Ph.D. Student
-contained, reproducible code.
--
Joshua Wiley
Ph.D. Student, Health Psychology
Programmer Analyst II, Statistical Consulting Group
University of California, Los Angeles
https://joshuawiley.com/
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https://stat.ethz.ch
-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
--
Joshua Wiley
Ph.D. Student, Health Psychology
Programmer Analyst II
Apologies to Bert, I see now that market is a variable in the
dataset, not a generic name for market indicators. lm() with a matrix
as the outcome seems the best approach here.
Josh
On Wed, Jul 4, 2012 at 12:12 PM, Joshua Wiley jwiley.ps...@gmail.com wrote:
On Wed, Jul 4, 2012 at 11:48 AM
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
--
Joshua Wiley
Ph.D. Student, Health Psychology
Programmer Analyst II, Statistical Consulting Group
, reproducible code.
--
Joshua Wiley
Ph.D. Student, Health Psychology
Programmer Analyst II, Statistical Consulting Group
University of California, Los Angeles
https://joshuawiley.com/
__
R-help@r-project.org mailing list
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-guide.html
and provide commented, minimal, self-contained, reproducible code.
--
Joshua Wiley
Ph.D. Student, Health Psychology
Programmer Analyst II, Statistical Consulting Group
University of California, Los Angeles
https://joshuawiley.com/
__
R-help
that there are better ways to save yourself
code, but I can say that there often are.
greetings
Jessica
On 28.06.2012, at 17:15, Joshua Wiley wrote:
Hi Jessica,
x - call(plot, quote(pcaI))
eval(x)
that said, I suspect you would be better off avoiding this idiom
altogether. Storing unevaluated
read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
--
Joshua Wiley
Ph.D. Student, Health Psychology
Programmer Analyst II, Statistical Consulting Group
University of California, Los Angeles
https
and provide commented, minimal, self-contained, reproducible code.
--
Joshua Wiley
Ph.D. Student, Health Psychology
Programmer Analyst II, Statistical Consulting Group
University of California, Los Angeles
https://joshuawiley.com/
__
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