hi everyone, im trying to proccess chromosomeExplorer and i get this error:
> ce <- ChromosomeExplorer(cbs) > process(ce, verbose=verbose) ERROR caught in onFit.CopyNumberSegmentationModel(): <simpleError in plotDev(pathname, width = width, height = height): unable to start device> I get some plots done and others not... > sessionInfo() R version 2.8.0 (2008-10-20) i386-pc-mingw32 locale: LC_COLLATE=Spanish_Spain.1252;LC_CTYPE=Spanish_Spain. 1252;LC_MONETARY=Spanish_Spain.1252;LC_NUMERIC=C;LC_TIME=Spanish_Spain. 1252 attached base packages: [1] stats graphics grDevices utils datasets methods base other attached packages: [1] RColorBrewer_1.0-2 DNAcopy_1.16.0 aroma.affymetrix_0.9.5 aroma.apd_0.1.3 R.huge_0.1.6 [6] affxparser_1.14.0 aroma.core_0.9.5 aroma.light_1.9.2 digest_0.3.1 matrixStats_0.1.3 [11] R.rsp_0.3.4 R.cache_0.1.7 R.utils_1.0.9 R.oo_1.4.6 R.methodsS3_1.0.3 > str(ce) Classes 'ChromosomeExplorer', 'Explorer', 'Object' atomic [1:1] NA ..- attr(*, ".env")=<environment: 0x0363e61c> ..- attr(*, "...instantiationTime")= POSIXct[1:1], format: "2008-12-02 17:00:28" > str(cbs) Classes 'CbsModel', 'CopyNumberSegmentationModel', 'CopyNumberChromosomalModel', 'ChromosomalModel', 'Object' atomic [1:1] NA ..- attr(*, ".env")=<environment: 0x03df1114> ..- attr(*, "...instantiationTime")= POSIXct[1:1], format: "2008-12-02 17:00:09" thanks for your help :) nice day! maria --~--~---------~--~----~------------~-------~--~----~ When reporting problems on aroma.affymetrix, make sure 1) to run the latest version of the package, 2) to report the output of sessionInfo() and traceback(), and 3) to post a complete code example. You received this message because you are subscribed to the Google Groups "aroma.affymetrix" group. To post to this group, send email to aroma-affymetrix@googlegroups.com To unsubscribe from this group, send email to [EMAIL PROTECTED] For more options, visit this group at http://groups.google.com/group/aroma-affymetrix?hl=en -~----------~----~----~----~------~----~------~--~---
