Hi. On Sat, Sep 17, 2011 at 5:37 AM, marco <hardstar...@gmail.com> wrote: > Dear Madam or Sir > Is there any way in aroma.affymetrix for measuring how well a gene > is detected for human exon 1.0 ST array and human Gene 1.0 ST array? I > mean method with same function as paCalls() in package oligo.
Unfortunately, there are no corresponding implementations for "detection above background" (DABG) or 'PSDABG' as in oligo. /Henrik For the record, DAGB has been discussed earlier in the following thread: * 'exon array next steps', 2011-02-03; https://groups.google.com/d/topic/aroma-affymetrix/uxZXt_exjeQ/discussion * 'FIRMAGene with masked CEL files', 2009-11-16; https://groups.google.com/d/topic/aroma-affymetrix/c6NtSmbbRhs/discussion > Thanks a lot!! > > > > -- > Lin Pei > graduate student > Cancer Institute > Southern Medical University > Guangzhou, China > postal code/zip 510515 > Tel, Fax: 86 20 61648710 > > -- > When reporting problems on aroma.affymetrix, make sure 1) to run the latest > version of the package, 2) to report the output of sessionInfo() and > traceback(), and 3) to post a complete code example. > > > You received this message because you are subscribed to the Google Groups > "aroma.affymetrix" group with website http://www.aroma-project.org/. > To post to this group, send email to aroma-affymetrix@googlegroups.com > To unsubscribe and other options, go to http://www.aroma-project.org/forum/ > -- When reporting problems on aroma.affymetrix, make sure 1) to run the latest version of the package, 2) to report the output of sessionInfo() and traceback(), and 3) to post a complete code example. You received this message because you are subscribed to the Google Groups "aroma.affymetrix" group with website http://www.aroma-project.org/. To post to this group, send email to aroma-affymetrix@googlegroups.com To unsubscribe and other options, go to http://www.aroma-project.org/forum/
