Hello! I am a new user of aroma.affymetrix. What I am trying to do is to profile hundreds of U133 chips. I have two questions:
1. Where can I find specific info regarding the reading, preprocessing of CEL files of U133 type? 2. I tried to convert affymetrix' ASCII CDF into binary and got some error: > cdfFiles[1] [1] "annotationData/chipTypes/HG-U133A/HG-U133A.cdf" > convertCdf(cdfFiles[1], > "annotationData/chipTypes/HG-U133A/HG-U133A_binary.cdf", verbose=T, force=T) Reading CDF header... Reading CDF header...done Reading CDF QC units... Reading CDF QC units...done Reading CDF units... Reading CDF units...done Writing CDF structure... Error in nchar(unitnamesFF) : invalid multibyte string 8527 Timing stopped at: 0.22 0 0.21 I appreciate your help to get me moving. Best, Sean -- When reporting problems on aroma.affymetrix, make sure 1) to run the latest version of the package, 2) to report the output of sessionInfo() and traceback(), and 3) to post a complete code example. You received this message because you are subscribed to the Google Groups "aroma.affymetrix" group with website http://www.aroma-project.org/. To post to this group, send email to aroma-affymetrix@googlegroups.com To unsubscribe and other options, go to http://www.aroma-project.org/forum/
