Sorry, that should have been:
acs <- getAromaCellSequenceFile(cdf); cells <- getAlleleCellPairs(cdf, verbose=verbose); data <- getSnpNucleotides(acs, cells=cells, verbose=-50); Look for the "Unique SNP positions:" output. /Henrik On Sun, Jan 8, 2012 at 3:23 PM, D Goode <dgoode.stanf...@gmail.com> wrote: > Hi Henrik, > > Thanks for getting back to me. > > I get another error message when I run the commands you suggested: > >> acs <- getAromaCellSequenceFile(cdf); > >> data <- getSnpNucleotides(acs, verbose=-50); > > Error in is.matrix(cells) : 'cells' is missing > > > David > > -- > When reporting problems on aroma.affymetrix, make sure 1) to run the latest > version of the package, 2) to report the output of sessionInfo() and > traceback(), and 3) to post a complete code example. > > > You received this message because you are subscribed to the Google Groups > "aroma.affymetrix" group with website http://www.aroma-project.org/. > To post to this group, send email to aroma-affymetrix@googlegroups.com > To unsubscribe and other options, go to http://www.aroma-project.org/forum/ -- When reporting problems on aroma.affymetrix, make sure 1) to run the latest version of the package, 2) to report the output of sessionInfo() and traceback(), and 3) to post a complete code example. You received this message because you are subscribed to the Google Groups "aroma.affymetrix" group with website http://www.aroma-project.org/. To post to this group, send email to aroma-affymetrix@googlegroups.com To unsubscribe and other options, go to http://www.aroma-project.org/forum/
