On Sat, Jan 11, 2014 at 4:59 AM,  <ndigi...@gmail.com> wrote:
> Hi Jerry,
>
> Have you been able to resolve this issue?
> I ran into the same problem while working with matlab:

What's this sudden interest from the Matlab side and which Matlab
toolbox is the source of all this?
>
> Warning: The ChipType (Mouse430_2) of CEL file GSM315892.cel does not
> match the ChipType (Mouse430A_2) of library file Mouse430A_2.CDF.
> In celintensityread at 248
> Error using celintensityread (line 253)
> The Rows (1002) or Cols(1002) of CEL file GSM315892.cel does not match the
> Rows (732) or Cols(732) of library file Mouse430A_2.CDF. Please check the
> files are the correct.

As the message clearly indicates 'Mouse430_2' and 'Mouse430A_2' are
two different chip types.  As I wrote in my previous message to this
thread, the terms "CDF" and "chip type" must not be used
interchangeably,
cf. http://aroma-project.org/definitions/chipTypesAndCDFs.  It is
important to understand the difference.

/Henrik

>
> Please let me know!
> Thank you and have a nice weekend!
>
> Niki
>
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When reporting problems on aroma.affymetrix, make sure 1) to run the latest 
version of the package, 2) to report the output of sessionInfo() and 
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