Hi,
Could you also send a code example that generated this error ? From
what you sent there is no way to know what you did that generated this
error.
Best,
Pierre
On Fri, Jan 31, 2014 at 9:24 AM, <bibhubioin...@gmail.com> wrote:
> Hello sir,
>
> i am getting following error. i am giving session info() and traceback ()
> i have tried many option..differrnt system and file name but all failed
> Please help me .Previously i was able to run sucessfully . But now i am
> facing the problem
>
>> traceback()
> 31: stop("Argument 'filename' should be a single file: ", paste(filename,
> collapse = ", "))
> 30: readCelHeader(pathname)
> 29: getHeader.AffymetrixCelFile(this)
> 28: getHeader(this)
> 27: getCdf.AffymetrixCelFile(getOneFile(this), ...)
> 26: getCdf(getOneFile(this), ...)
> 25: getCdf.AffymetrixCelSet(this)
> 24: getCdf(this)
> 23: clearCache.AffymetrixCelSet(object)
> 22: clearCache(object)
> 21: clone.GenericDataFileSet(this, clear = TRUE, verbose = FALSE)
> 20: NextMethod("clone", clear = TRUE, verbose = less(verbose))
> 19: clone.AffymetrixCelSet(this)
> 18: clone(this)
> 17: extract.GenericDataFileSet(dsOut, fullnames, onMissing = onMissing)
> 16: extract(dsOut, fullnames, onMissing = onMissing)
> 15: getOutputDataSet.AromaTransform(this, incomplete = TRUE, ...,
> verbose = less(verbose, 5), cdf = NA, checkChipType = FALSE)
> 14: NextMethod(generic = "getOutputDataSet", NA, incomplete = TRUE,
> cdf = NA, checkChipType = FALSE, verbose = FALSE)
> 13: do.call("NextMethod", args)
> 12: getOutputDataSet.Transform(this, incomplete = TRUE, ..., verbose =
> less(verbose,
> 5))
> 11: getOutputDataSet(this, incomplete = TRUE, ..., verbose = less(verbose,
> 5))
> 10: findFilesTodo.AromaTransform(this, ...)
> 9: findFilesTodo(this, ...)
> 8: isDone.AromaTransform(this)
> 7: isDone(this)
> 6: sprintf("Is done: %s", isDone(this))
> 5: as.character.AromaTransform(x)
> 4: as.character(x)
> 3: print(as.character(x))
> 2: print.Object(NA)
> 1: print(NA)
>> rs
> Error: object 'rs' not found
>> sessionInfo()
> R version 3.0.2 (2013-09-25)
> Platform: x86_64-w64-mingw32/x64 (64-bit)
>
> locale:
> [1] LC_COLLATE=English_India.1252 LC_CTYPE=English_India.1252
> [3] LC_MONETARY=English_India.1252 LC_NUMERIC=C
> [5] LC_TIME=English_India.1252
>
> attached base packages:
> [1] stats graphics grDevices utils datasets methods base
>
> other attached packages:
> [1] aroma.light_1.32.0 matrixStats_0.8.14 aroma.affymetrix_2.11.1
> [4] aroma.core_2.11.3 R.devices_2.8.2 R.filesets_2.3.0
> [7] R.utils_1.29.1 R.oo_1.17.0 affxparser_1.34.0
> [10] R.methodsS3_1.6.1
>
> loaded via a namespace (and not attached):
> [1] aroma.apd_0.4.0 base64enc_0.1-1 digest_0.6.4 DNAcopy_1.36.0
> [5] PSCBS_0.40.3 R.cache_0.9.2 R.huge_0.6.0 R.rsp_0.9.28
> [9] tools_3.0.2
>>
>
> --
> --
> When reporting problems on aroma.affymetrix, make sure 1) to run the latest
> version of the package, 2) to report the output of sessionInfo() and
> traceback(), and 3) to post a complete code example.
>
>
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--
When reporting problems on aroma.affymetrix, make sure 1) to run the latest
version of the package, 2) to report the output of sessionInfo() and
traceback(), and 3) to post a complete code example.
You received this message because you are subscribed to the Google Groups
"aroma.affymetrix" group with website http://www.aroma-project.org/.
To post to this group, send email to aroma-affymetrix@googlegroups.com
To unsubscribe and other options, go to http://www.aroma-project.org/forum/
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