Hi , I have tried to do the same for MoEx10stv1 arrays by combining the BrainArray ENSE & ENSG cdfs. I have used buildCustomCdf.Public.R script from aroma website. But the resultant cdf only contains 103 units/transcript clusters.
How can I built or use the BrainArray cdfs (or any other cdfs) with aroma.affymetrix package? On Friday, January 27, 2012 7:40:31 PM UTC+2, Henrik Bengtsson wrote: > > Hi Steve, > > great. Yes, it's definitely worth sharing this and I'm happy to do it > via aroma-project.org. If you can provide me with a download link > where I can grab, then I'll put it on the servers. Some description > of the CDF would be useful too; I've create > > http://aroma-project.org/chipTypes/HuEx-1_0-st-v2/BrainArrayENSEandENSG > > which you can access and edit as soon as you login. I've sent you a > separate message with your login. > > Thanks > > Henrik > > On Thu, Jan 26, 2012 at 6:35 PM, Steve Pederson > <stephen....@adelaide.edu.au <javascript:>> wrote: > > Hi Henrik, > > > > > > > > I have generated a custom Cdf for HuEx-1_0-st-v2 arrays by combining the > > BrainArray ENSE & ENSG cdfs for the groups & units respectively, > including > > the mapping files. Is that something which would be worth putting up on > the > > aroma.project website, or is that beyond the scope of the project? > > > > > > > > Thanks, > > > > > > > > Steve > > > > -- > > When reporting problems on aroma.affymetrix, make sure 1) to run the > latest > > version of the package, 2) to report the output of sessionInfo() and > > traceback(), and 3) to post a complete code example. > > > > > > You received this message because you are subscribed to the Google Groups > > "aroma.affymetrix" group with website http://www.aroma-project.org/. > > To post to this group, send email to aroma-af...@googlegroups.com > <javascript:> > > To unsubscribe and other options, go to > http://www.aroma-project.org/forum/ > > -- -- When reporting problems on aroma.affymetrix, make sure 1) to run the latest version of the package, 2) to report the output of sessionInfo() and traceback(), and 3) to post a complete code example. You received this message because you are subscribed to the Google Groups "aroma.affymetrix" group with website http://www.aroma-project.org/. To post to this group, send email to aroma-affymetrix@googlegroups.com To unsubscribe and other options, go to http://www.aroma-project.org/forum/ --- You received this message because you are subscribed to the Google Groups "aroma.affymetrix" group. To unsubscribe from this group and stop receiving emails from it, send an email to aroma-affymetrix+unsubscr...@googlegroups.com. For more options, visit https://groups.google.com/d/optout.
