Bob MacCallum wrote:
> The tricks are (in no particular order)
>
> * share the plugin definition and configuration to everyone
>
> * configure the plugin using the the config files in
> Root's "/BASE 1 plugin configuration files" folder.
Hi
Thanks for replies Bob/Nicklas.
I had to make the following changes to the MGH stuff so far and have got
a little further.
BASE was getting upset because the first entry in the definition
was missing the 'maxChannels' parameter. Therefore, I deleted all
the BASEfile definitions apart from the last one which has a value
for 'maxChannels' and managed to configure the plugin successfully.
I had to make the following change to basefile-genelist.pl and
basefile-general.pl to get it to read the BASEfile correctly.
89c86
< elsif($currentsection eq "BASEfile") {
---
> elsif($currentsection eq "BASEfile" or $currentsection eq
'settings') {
93d89
Now although the PNG files are created correctly and copied to the
folder, the actual reporterlist information is not being imported into BASE.
The stdout output from the script is as follows:
BASEfile
section<tab>reporterlist
columns<tab>reporterId<tab>score
ECs4755 0.256762034483983
ECs3012 0.119996549971508
ECs2479 0.286847065875626
...
Now, looking at the BASE 2.5.0 sourcecode, there is no case in
"importData()" which handles a reporterlist section. So perhaps I should
not be surprised no data is being imported?
Can anyone confirm whether this is the case, and whether there is any
workaround?
Many thanks
Nick.
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