Micha Bayer wrote: >> -----Original Message----- >> From: Nicklas Nordborg [mailto:[EMAIL PROTECTED] >> Sent: 01 December 2008 10:10 >> To: BASE ML >> Subject: Re: [base] mass annotation of raw bioassays in BASE 2.8.4 -- >> problem with name/ID mapping >> >> Micha Bayer wrote: >>> Hi Nicklas, >>> >>> There is no icon showing in the Status column at all -- it's blank. >> The >>> "Used Values" column says "N/A" for both of the experimental factors >> I >>> specified. >>> >>> Not sure what's going on here. Is there anything else I can check to >>> make sure I haven't done this wrong? >> Ah... this functionality is not available for string/text annotations >> unless they are enumerations. >> >> /Nicklas > > > Ok -- that's better. I changed the annotation type to enumeration and I > did get the icon and when I clicked on it it did inherit the > annotations. However, now there are two new problems: > > 1. The status field for this annotation still says that there are > missing values (like it did *before* I clicked the icon) > > and > > 2. The raw bioassay has inherited multiple annotation values for this > experimental factor although it only has a single parent with a single > value for this factor (the biosource). From the earlier message in the > thread > (http://www.mail-archive.com/basedb-users@lists.sourceforge.net/msg01596 > .html) it sounded like this was only going to happen if there was more > than one parent with values for a given factor, or did I misunderstand > that?
Are you sure that everything is correctly linked? Use the "Experiment overview" to find out. It should find 1) The raw bioassay(s) that doesn't have the annotation. 2) The raw bioassays that has inherited the same annotation from multiple parents. Maybe it is as simple as re-linking one or more parents from the raw bioassays in 2) to the raw bioassays in 1). /Nicklas ------------------------------------------------------------------------- This SF.Net email is sponsored by the Moblin Your Move Developer's challenge Build the coolest Linux based applications with Moblin SDK & win great prizes Grand prize is a trip for two to an Open Source event anywhere in the world http://moblin-contest.org/redirect.php?banner_id=100&url=/ _______________________________________________ The BASE general discussion mailing list basedb-users@lists.sourceforge.net unsubscribe: send a mail with subject "unsubscribe" to [EMAIL PROTECTED]
