Tim and Dan,
Thank you both for for your replies. Dan's worked but it gave
me the released as distinct from the development version, I couldn't
get Tim's to work (my fault not Tim's) but I suspect that it would
have also given me the released version. I found I could get the development
version like this:
http://www.bioconductor.org/packages/2.12/bioc/html/easyRNASeq.html
Best wishes,
Rich
Richard A. Friedman, PhD
Associate Research Scientist,
Biomedical Informatics Shared Resource
Herbert Irving Comprehensive Cancer Center (HICCC)
Lecturer,
Department of Biomedical Informatics (DBMI)
Educational Coordinator,
Center for Computational Biology and Bioinformatics (C2B2)/
National Center for Multiscale Analysis of Genomic Networks (MAGNet)
Room 824
Irving Cancer Research Center
Columbia University
1130 St. Nicholas Ave
New York, NY 10032
(212)851-4765 (voice)
fried...@cancercenter.columbia.edu
http://cancercenter.columbia.edu/~friedman/
In memoriam, Ray Bradbury
On Nov 26, 2012, at 1:08 PM, Tim Triche, Jr. wrote:
> R CMD Stangle packageName/inst/doc/VignetteName.Rnw
>
> or
>
> R CMD Stangle packageName/vignettes/VignetteName.Rnw
>
> will deposit a file VignetteName.R into the corresponding directory and
> wah-lah, tout va bien.
>
>
>
> On Mon, Nov 26, 2012 at 10:04 AM, Richard Friedman
> <fried...@cancercenter.columbia.edu> wrote:
> Dear Bioconductor Developers,
>
> Released versions of Bioconductor packages generally come with an R
> script which
> contains what is done in the vignettes. Are these also available for
> development versions?
> If so, how can I get the script for a given package? I am interest in
> easyRNASeq in
> particular.
>
> Thanks and best wishes,
> Rich
>
> Richard A. Friedman, PhD
> Associate Research Scientist,
> Biomedical Informatics Shared Resource
> Herbert Irving Comprehensive Cancer Center (HICCC)
> Lecturer,
> Department of Biomedical Informatics (DBMI)
> Educational Coordinator,
> Center for Computational Biology and Bioinformatics (C2B2)/
> National Center for Multiscale Analysis of Genomic Networks (MAGNet)
> Room 824
> Irving Cancer Research Center
> Columbia University
> 1130 St. Nicholas Ave
> New York, NY 10032
> (212)851-4765 (voice)
> fried...@cancercenter.columbia.edu
> http://cancercenter.columbia.edu/~friedman/
>
> In memoriam, Ray Bradbury
>
>
> [[alternative HTML version deleted]]
>
> _______________________________________________
> Bioc-devel@r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/bioc-devel
>
>
>
> --
> A model is a lie that helps you see the truth.
>
> Howard Skipper
>
[[alternative HTML version deleted]]
_______________________________________________
Bioc-devel@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/bioc-devel
