On Mon, Nov 26, 2012 at 10:30 AM, Richard Friedman <[email protected]> wrote: > Tim and Dan, > > Thank you both for for your replies. Dan's worked but it gave > me the released as distinct from the development version,
My mistake. Substitute "devel" for "release" in both URLs and you'll get what you want. I couldn't > get Tim's to work (my fault not Tim's) but I suspect that it would > have also given me the released version. It depends which version of the package you had installed. Dan I found I could get the development > version like this: > > http://www.bioconductor.org/packages/2.12/bioc/html/easyRNASeq.html > > > Best wishes, > Rich > Richard A. Friedman, PhD > Associate Research Scientist, > Biomedical Informatics Shared Resource > Herbert Irving Comprehensive Cancer Center (HICCC) > Lecturer, > Department of Biomedical Informatics (DBMI) > Educational Coordinator, > Center for Computational Biology and Bioinformatics (C2B2)/ > National Center for Multiscale Analysis of Genomic Networks (MAGNet) > Room 824 > Irving Cancer Research Center > Columbia University > 1130 St. Nicholas Ave > New York, NY 10032 > (212)851-4765 (voice) > [email protected] > http://cancercenter.columbia.edu/~friedman/ > > In memoriam, Ray Bradbury > > On Nov 26, 2012, at 1:08 PM, Tim Triche, Jr. wrote: > > R CMD Stangle packageName/inst/doc/VignetteName.Rnw > > or > > R CMD Stangle packageName/vignettes/VignetteName.Rnw > > will deposit a file VignetteName.R into the corresponding directory and > wah-lah, tout va bien. > > > > On Mon, Nov 26, 2012 at 10:04 AM, Richard Friedman > <[email protected]> wrote: >> >> Dear Bioconductor Developers, >> >> Released versions of Bioconductor packages generally come with an >> R script which >> contains what is done in the vignettes. Are these also available for >> development versions? >> If so, how can I get the script for a given package? I am interest in >> easyRNASeq in >> particular. >> >> Thanks and best wishes, >> Rich >> >> Richard A. Friedman, PhD >> Associate Research Scientist, >> Biomedical Informatics Shared Resource >> Herbert Irving Comprehensive Cancer Center (HICCC) >> Lecturer, >> Department of Biomedical Informatics (DBMI) >> Educational Coordinator, >> Center for Computational Biology and Bioinformatics (C2B2)/ >> National Center for Multiscale Analysis of Genomic Networks (MAGNet) >> Room 824 >> Irving Cancer Research Center >> Columbia University >> 1130 St. Nicholas Ave >> New York, NY 10032 >> (212)851-4765 (voice) >> [email protected] >> http://cancercenter.columbia.edu/~friedman/ >> >> In memoriam, Ray Bradbury >> >> >> [[alternative HTML version deleted]] >> >> _______________________________________________ >> [email protected] mailing list >> https://stat.ethz.ch/mailman/listinfo/bioc-devel > > > > > -- > A model is a lie that helps you see the truth. > > Howard Skipper > > _______________________________________________ [email protected] mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
