Thanks, Kasper. On your second point: Yes, several recent updates. The bump to v1.1.2 was two days ago, so I figured that would have been reflected in a newer build already. I will give it a few more days. Jamie
> On Jan 26, 2017, at 11:57 AM, Kasper Daniel Hansen > <kasperdanielhan...@gmail.com> wrote: > > It happens in devel that your dependencies fail and then your package fails. > Right now XCMS fails in devel because mzR fails. That will presumably be > sorted out. > > The latest build report > http://bioconductor.org/checkResults/3.5/bioc-LATEST/LOBSTAHS/ > <http://bioconductor.org/checkResults/3.5/bioc-LATEST/LOBSTAHS/> > is 1.1.1. Did you do a couple of updates very recently - remember the build > system gets run (at most) daily. > > Best, > Kasper > > On Thu, Jan 26, 2017 at 9:53 AM, James Collins <james.r.coll...@aya.yale.edu > <mailto:james.r.coll...@aya.yale.edu>> wrote: > Hi all: > > Two questions regarding the LOBSTAHS package: > > 1. Dev build seems to be failing (“error”) on toluca2 after I pushed some > updates from our git repository to Bioc svn. Error is: > * installing to library > ‘/Library/Frameworks/R.framework/Versions/3.4/Resources/library’ > ERROR: dependencies ‘xcms’, ‘CAMERA’ are not available for package ‘LOBSTAHS’ > * removing > ‘/Library/Frameworks/R.framework/Versions/3.4/Resources/library/LOBSTAHS’ > However, seems to build fine on oaxaca. Any ideas why this is happening? xcms > and CAMERA should be available for the package, correct? > > 2. After bumping the version number (from 1.1.1 to 1.1.2 and then 1.1.3) with > the updates, the latest version (1.1.3) does not appear to be showing on the > dev page, which leads me to believe it is not the version being disseminated > with biocLite() > > http://bioconductor.org/packages/3.5/bioc/html/LOBSTAHS.html > <http://bioconductor.org/packages/3.5/bioc/html/LOBSTAHS.html> > <http://bioconductor.org/packages/3.5/bioc/html/LOBSTAHS.html > <http://bioconductor.org/packages/3.5/bioc/html/LOBSTAHS.html>> > > Perhaps this is because I cherry-pick all my commits when committing from git > to the Bioc svn? Or because of the error message? > > Thanks in advance! > > Jamie Collins > > > [[alternative HTML version deleted]] > > _______________________________________________ > Bioc-devel@r-project.org <mailto:Bioc-devel@r-project.org> mailing list > https://stat.ethz.ch/mailman/listinfo/bioc-devel > <https://stat.ethz.ch/mailman/listinfo/bioc-devel> [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
