That could work, also. On Fri, May 19, 2017 at 10:27 AM, Martin Morgan <martin.mor...@roswellpark.org> wrote: > On 05/19/2017 12:14 PM, Michael Lawrence wrote: >> >> Since SeqArray already imports SummarizedExperiment and >> VariantAnnotation, why can't it just move them to Depends and use >> their generics? > > > do they need to be moved to Depends? Or simply import the generic export the > new method(s) (and generic)? > > Martin > >> >> On Fri, May 19, 2017 at 8:39 AM, Stephanie M. Gogarten >> <sdmor...@u.washington.edu> wrote: >>> >>> Dear Core Team, >>> >>> What do you think about adding the following generics to BiocGenerics? >>> >>> colData >>> rowRanges >>> ref >>> alt >>> qual >>> filt >>> header >>> fixed >>> info >>> geno >>> >>> They are currently defined by both VariantAnnotation/SummarizedExperiment >>> and SeqArray. Given the increasingly widespread use of VCF files, it >>> seems >>> likely that other packages may want to use them in future also. >>> >>> Stephanie >>> >>> _______________________________________________ >>> Bioc-devel@r-project.org mailing list >>> https://stat.ethz.ch/mailman/listinfo/bioc-devel >> >> >> _______________________________________________ >> Bioc-devel@r-project.org mailing list >> https://stat.ethz.ch/mailman/listinfo/bioc-devel >> > > > This email message may contain legally privileged and/or...{{dropped:2}} > > > _______________________________________________ > Bioc-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/bioc-devel
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