Hi Kevin,
If your Github and SVN repos separated so much, then I’d just wait for the
transition and then go from there.
Once the git server is alive, you can make a new GitHub repo at that point.
Nitesh
> On Aug 10, 2017, at 10:18 AM, Kevin RUE <kevinru...@gmail.com> wrote:
>
> Hi all,
>
> I think I'm facing a similar scenario ("prior history"), although I have
> messed up my original GitHub repo
> (https://github.com/kevinrue/TVTB/commits/master) beyond my ability to
> synchronise it back to a working state.
>
> Basically, a few months ago, a bad mix of `git svn rebase` and `git merge
> master` replayed a whole lot of commit, likely the entire local history of
> commits, a couple of times (my Github master branch now shows 1,043 commits,
> against 333 in the Bioconductor-mirror/TVTB:master. I can safely say that I
> haven't been _that_ productive.
>
> After a few attempts to reset/merge/rebase/cry, I gave up the idea of
> reconciliation between my GitHub and the Bioc SVN; I abandoned my own GitHub
> repo and interacted with the SVN directly.
>
> Now my GitHub repo is behind the current state of my package in
> git.bioconductor.org (version 1.1.10 vs. 1.3.1), with different commit
> histories, that I can't even start to unravel.
>
> At that point, I dream of a way to simply update my own GitHub master to the
> current state of the git.bioconductor.org:packages/TVTB master branch, and
> use that commit as the root of all future development (branches). Is that
> something realistic/worth the effort ?
>
> I do have a feeling that the cleanest option would be to abandon my GitHub
> repo, clone from git.bioconductor.org, and make a new GitHub repo from that
> point... but I thought I'd ask one last time before giving up on the original
> repo.
>
> Many thanks in advance.
> Kevin
>
>
>
>
> On Fri, Jul 28, 2017 at 7:09 PM, McDavid, Andrew
> <andrew_mcda...@urmc.rochester.edu> wrote:
> Hi Nitesh,
>
> Schematically, my git repo started with commit D, while bioconductor's
> started with A. It's possible this was because I did something wrong
> managing the bioconductor repo, but since I can't rewrite history, there's
> not anything I can do about that now. Their "founding" commits are distinct.
>
>
> Bioconductor A---B---C
> / /
> Master D---E---F---G---I
>
> Since then, I have I have been cherry-picking changes from master onto
> bioconductor per my understanding of recommended practice.
> If I try to merge bioconductor onto master, or vice versa, I get the
> unrelated histories warning. Vlad's suggestion works, but results in
> replaying ~700 commits onto the bioconductor repo...not so nice maybe.
>
> The https://github.com/Bioconductor-mirror/MAST.git repo is to make SVN
> commits from the git tree.
>
>
> > On Jul 28, 2017, at 11:33 AM, Turaga, Nitesh
> > <nitesh.tur...@roswellpark.org> wrote:
> >
> > I would be careful before using the --allow-unrelated-histories flag.
> > Please investigate where there is a difference.
> >
> > Also, i don't understand why you are using the bioconductor-git-mirror?
> > Your non-zero commit history should be related to bioconductor git server.
> >
> > Best
> >
> > Nitesh
> >
> > Get Outlook for Android
> >
> >
> >
> > From: Vladimir Kiselev
> > Sent: Thursday, July 27, 5:11 PM
> > Subject: Re: [Bioc-devel] git transition for projects with prior git history
> > To: McDavid, Andrew, bioc-devel@r-project.org
> >
> >
> > Hi Andrew, I solved it by just adding '--allow-unrelated-histories' to
> > force the merge:
> > https://stackoverflow.com/questions/37937984/git-refusing-to-merge-unrelated-histories
> > Cheers, Vlad On Thu, Jul 27, 2017 at 9:53 PM McDavid, Andrew <
> > andrew_mcda...@urmc.rochester.edu> wrote: > Is there a recommended recipe
> > to utilize the git.bioconductor.org< > http://git.bioconductor.org> remote
> > with an existing git repo that has > non-zero history? I tried adding the
> > git.bioconductor.org< > http://git.bioconductor.org> as a remote, making a
> > branch, and then > checking out a branch on that remote, but it gave my
> > computer sad. Do I > need to clone a new repo instead? > > Example: > $ git
> > remote -vv > bioc https://github.com/Bioconductor-mirror/MAST.git (fetch) >
> > bioc https://github.com/Bioconductor-mirror/MAST.git (push) > biocgit
> > g...@git.bioconductor.org:packages/MAST > (fetch) > biocgit
> > g...@git.bioconductor.org:packages/MAST > (push) > origin
> > g...@github.com:RGLab/MAST.git (fetch) > origin git
> @github.com:RGLab/MAST.git (push > > $ git fetch biocgit > $ git checkout -b
> bgMaster --track biocgit/master > ... > > ... > $ git merge master bgMaster >
> fatal: refusing to merge unrelated histories > > [[alternative HTML version
> deleted]] > > _______________________________________________ >
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