Hi Stefano, Thank you for your share.
Jianhong. From: Stefano de Pretis <ste.d...@gmail.com> Date: Friday, April 17, 2020 at 3:18 PM To: "Jianhong Ou, Ph.D." <jianhong...@duke.edu> Cc: "bioc-devel@r-project.org" <bioc-devel@r-project.org> Subject: Re: [Bioc-devel] Got timeout for machv2 BUILD HI, We solved a similar issue for the INSPEcT package avoiding the parallelization in the computation of examples and vignettes. In our case it caused the timeout in the Windows environment. Best, Stefano Il giorno ven 17 apr 2020 alle 21:11 Jianhong Ou, Ph.D. <jianhong...@duke.edu<mailto:jianhong...@duke.edu>> ha scritto: Hi, I got timeout for my package motifStack in machv2. But I don't know what cuased the issue. Any help would be greatly appreciated. Jianhong. ________________________________ From: Jianhong Ou, Ph.D. Sent: Wednesday, April 15, 2020 7:53 AM To: bioc-devel@r-project.org<mailto:bioc-devel@r-project.org> <bioc-devel@r-project.org<mailto:bioc-devel@r-project.org>> Subject: Got timeout for machv2 BUILD Hi, Hope you are doing well. I got timeout for my package motifStack in machv2. The ellapsedTime is 2403.0 seconds while in tokay2 is 82.1 seconds and in malbec2 is 126.1 seconds. I have limited information how to debug. Could you share your suggestion? Thank you. Yours Sincerely, Jianhong Ou Email: jianhong...@duke.edu<mailto:jianhong...@duke.edu> Bioinformatician II Department of Cell Biology Duke University School of Medicine Durham, NC, 27710 Confidentiality Notice:\ This e-mail message, including ...{{dropped:12}} _______________________________________________ Bioc-devel@r-project.org<mailto:Bioc-devel@r-project.org> mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel<https://urldefense.com/v3/__https:/stat.ethz.ch/mailman/listinfo/bioc-devel__;!!OToaGQ!_mkfYqnIeICeuNSlRjDUKfpXS-GRpoPFr1XW6aN7QZSagvpt8XLEfRHYPXaLPtJcYQM$> [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
