Hervé,

    It could be. The test I did today was on a clean windows machine, so I did build open babel from scratch with Rtools40. I don't have an openbabel built with the old version to check. The INSTALL file of ChemmineOB provides detail instructions for building OpenBabel on windows.

Kevin

On 4/23/20 12:52 PM, Hervé Pagès wrote:
On 4/23/20 12:45, Hervé Pagès wrote:
On 4/23/20 10:45, Kevin Horan wrote:
Bioc,

The build of ChemmineOB is failing on windows, which is also causing 3 other packages to fail (ChemmineR, eiR, and fmcsR). I was able to build the package on my own windows machine (Windows Server 2012 R2 Standard) without any error. I used R devel. The content of this package has not been changed since October 2018.

Right but the toolchain used for R 4.0.0 on Windows now is Rtool40 which is a huge upgrade from the previous one. Could this be related to the compilation failure?

It also occurs to me that we might need to recompile Open Babel with the new toolchain on tokay2. Could that be the problem?

H.


Best,
H.


Can someone please look into it? Thanks. The build link is https://urldefense.proofpoint.com/v2/url?u=https-3A__bioconductor.org_checkResults_devel_bioc-2DLATEST_ChemmineOB_tokay2-2Dbuildsrc.html&d=DwICAg&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=wmRn4CjxRi7ewvrtWLIyKM2Tockd3ZOaWfhhytkrbCM&s=hoMGH754DpRKnA8RGcuSStVub2IwW2BGrG6lvBK4io4&e=

Kevin

_______________________________________________
Bioc-devel@r-project.org mailing list
https://urldefense.proofpoint.com/v2/url?u=https-3A__stat.ethz.ch_mailman_listinfo_bioc-2Ddevel&d=DwICAg&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=wmRn4CjxRi7ewvrtWLIyKM2Tockd3ZOaWfhhytkrbCM&s=RuXC_DouGnZ1Y3CsW5TtbzVY-lzbyy3KiFm28uqNOos&e=



_______________________________________________
Bioc-devel@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/bioc-devel

Reply via email to