Hello BioConductor Team, We are in the final steps prior to submitting a new package to Bioconductor. As recommended, we want our package to pass BiocCheck with no Errors, Warnings, or Notes. However, we have a problem regarding the indentation of a vignette written rmarkdown.
-- BEGIN BiocCheck output -- [3] "Consider multiples of 4 spaces for line indents, 11 lines(0%) are not -- END BiocCheck output -- The problem seems to be the indentation required for yaml syntax of the author section. In the section, we have several authors, affiliations, and emails using just multiple of 2 space indentation. The problem is that we could found a way to correctly indent such a section without breaking the vignette construction process. We have observed that In section 3.1 of the biocstyle vignette about authoring using Rmarkdown ( https://www.bioconductor.org/packages/release/bioc/vignettes/BiocStyle/inst/doc/AuthoringRmdVignettes.html) The author and affiliation sections uses just 2 spaces instead of the recommended multiple of 4. So, in your opinion, what would the recommended strategy for dealing with this issue? Regards, Carlos A. Catania (AKA Harpo) [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel