Ah, I see. Ok thanks for that clarification. Do you know roughly how long it might take to build?
On Thu, Dec 10, 2020 at 11:15 AM James W. MacDonald <jmac...@uw.edu> wrote: > You also have a commit from yesterday in master that isn't yet reflected > on the build machine, again because it takes time for the build machine to > build stuff. IIRC we are over 24 hours per build, but that may be old news > (FAKE NEWS!). > > On Thu, Dec 10, 2020 at 11:09 AM James W. MacDonald <jmac...@uw.edu> > wrote: > >> It looks like you bumped it just yesterday: >> >> commit 5a9929aed33e40c11609f3d064b114d95d95e6cb >> Author: Ted Natoli <ted.e.nat...@gmail.com> >> Date: Wed Dec 9 16:42:16 2020 -0500 >> >> fixing version bump >> >> commit accd8a5871fe38a8a1f63b32b4e79d2640e86792 >> Author: Ted Natoli <ted.e.nat...@gmail.com> >> Date: Wed Dec 9 16:32:47 2020 -0500 >> >> update RELEASE version number >> >> And it takes a while to propagate, so you are probably being too >> impatient. >> >> Jim >> >> On Thu, Dec 10, 2020 at 10:59 AM Ted Natoli <ted.e.nat...@gmail.com> >> wrote: >> >>> Hi James, >>> >>> Thanks for the response. The corresponding changes were committed to the >>> master branch on November 23. The development build report seems to be >>> using the correct code, or at least close to it, as the most recent commit >>> it shows there is from December 8. I did push to both github and >>> bioconductor repos and I did bump the version number too, which is >>> reflected in the development build report but not release. >>> >>> Here are links to the build reports if it's helpful. >>> >>> devel: https://bioconductor.org/checkResults/3.13/bioc-LATEST/cmapR/ >>> release: https://bioconductor.org/checkResults/3.12/bioc-LATEST/cmapR/ >>> >>> Thanks again, >>> Ted >>> >>> On Thu, Dec 10, 2020 at 10:41 AM James W. MacDonald <jmac...@uw.edu> >>> wrote: >>> >>>> Did you bump your version number? How long has it been since you >>>> committed the changes? If you have a github repo, you remembered to push to >>>> both the Bioconductor and GitHub repos? >>>> >>>> On Thu, Dec 10, 2020 at 10:19 AM Ted Natoli <ted.e.nat...@gmail.com> >>>> wrote: >>>> >>>>> Hello all, >>>>> >>>>> I'm trying to update the released version of my package, cmapR, >>>>> because one >>>>> of the packages it depends on has been deprecated and hence install of >>>>> cmapR now fails. >>>>> >>>>> I've followed the instructions here in order to get those changes over >>>>> to >>>>> the released version of the package: >>>>> >>>>> https://bioconductor.org/developers/how-to/git/bug-fix-in-release-and-devel/ >>>>> >>>>> However, I don't see that the released version has been updated. >>>>> Looking at >>>>> the build reports, the latest commit reflected there is from before I >>>>> made >>>>> the code changes. How do I get these changes to propagate to the >>>>> release >>>>> branch? >>>>> >>>>> I'm sure I must be missing something very basic, but any help would be >>>>> appreciated. >>>>> >>>>> Thanks in advance, >>>>> Ted >>>>> >>>>> [[alternative HTML version deleted]] >>>>> >>>>> _______________________________________________ >>>>> Bioc-devel@r-project.org mailing list >>>>> https://stat.ethz.ch/mailman/listinfo/bioc-devel >>>>> >>>> >>>> >>>> -- >>>> James W. MacDonald, M.S. >>>> Biostatistician >>>> University of Washington >>>> Environmental and Occupational Health Sciences >>>> 4225 Roosevelt Way NE, # 100 >>>> Seattle WA 98105-6099 >>>> >>> >> >> -- >> James W. MacDonald, M.S. >> Biostatistician >> University of Washington >> Environmental and Occupational Health Sciences >> 4225 Roosevelt Way NE, # 100 >> Seattle WA 98105-6099 >> > > > -- > James W. MacDonald, M.S. > Biostatistician > University of Washington > Environmental and Occupational Health Sciences > 4225 Roosevelt Way NE, # 100 > Seattle WA 98105-6099 > [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel