Hi all, It seems that Bioconductor multi build/check does NOT use the updated git of ClusterJudge package. Here is the error reported: https://master.bioconductor.org/checkResults/3.12/bioc-LATEST/ClusterJudge/malbec1-checksrc.html
However I fixed the error about a month ago and pushed the changes. The small changes are in R/download_Yeast_GO_mapping.R and simply truncates the number of columns in a delimited file that is downloaded: I tested and it works fine after a fresh clone from bioconductor: $git clone g...@git.bioconductor.org:packages/ClusterJudge.git git remote -v origin g...@git.bioconductor.org:packages/ClusterJudge.git (fetch) origin g...@git.bioconductor.org:packages/ClusterJudge.git (push) upstream g...@git.bioconductor.org:packages/ClusterJudge (fetch) upstream g...@git.bioconductor.org:packages/ClusterJudge (push) The changes are also present in https://github.com/apasculescu/ClusterJudge however they don't seem to be pulled by BioConductor when it runs the multi build/check. Where is Bioconductor pulling the ClusterJudge code from? Many thanks, Adrian Pasculescu [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
