This is a known problem and is being investigated. Thanks for the report. On Sat, May 8, 2021 at 8:18 AM Gordon K Smyth <sm...@wehi.edu.au> wrote:
> I am currently unable to install any Bioconductor 3.13 packages using > BiocManager for Windows. Here is a sample R session using R 4.1.0beta for > Windows. Notice the first time I type `install("Biobase")` there is no > error message but the package is not installed. The second time and > subsequent times I use install() I get an error message mentioning > `readRDS`. > > Any ideas? > Thanks > Gordon > > > library(BiocManager) > Bioconductor version 3.13 (BiocManager 1.30.13), ?BiocManager::install for > help > > install("Biobase") > Bioconductor version 3.13 (BiocManager 1.30.13), R 4.1.0 beta (2021-05-06 > r80268) > Installing package(s) 'BiocVersion', 'Biobase' > also installing the dependency ‘BiocGenerics’ > > > library(Biobase) > Error in library(Biobase) : there is no package called ‘Biobase’ > > install("Biobase") > Bioconductor version 3.13 (BiocManager 1.30.13), R 4.1.0 beta (2021-05-06 > r80268) > Installing package(s) 'BiocVersion', 'Biobase' > also installing the dependency ‘BiocGenerics’ > > Error in readRDS(dest) : error reading from connection > > sessionInfo() > R version 4.1.0 beta (2021-05-06 r80268) > Platform: x86_64-w64-mingw32/x64 (64-bit) > Running under: Windows 10 x64 (build 18363) > > Matrix products: default > > locale: > [1] LC_COLLATE=English_Australia.1252 LC_CTYPE=English_Australia.1252 > [3] LC_MONETARY=English_Australia.1252 LC_NUMERIC=C > [5] LC_TIME=English_Australia.1252 > > attached base packages: > [1] stats graphics grDevices utils datasets methods base > > other attached packages: > [1] BiocManager_1.30.13 > > loaded via a namespace (and not attached): > [1] compiler_4.1.0 tools_4.1.0 > > ------------------------------------------ > Professor Gordon K Smyth > Joint Head, Bioinformatics Division > Walter and Eliza Hall Institute of Medical Research > > [WEHI Logo] > > > Walter and Eliza Hall Institute of Medical Research > 1G Royal Parade Parkville Victoria 3052 Australia > > www.wehi.edu.au<https://wehi.edu.au> > > Twitter<https://twitter.com/WEHI_research> | Facebook< > https://www.facebook.com/WEHIresearch/> | Instagram< > https://www.instagram.com/wehi_research> | Youtube< > https://www.youtube.com/user/WEHImovies> | LinkedIn< > https://www.linkedin.com/company/wehi_research> > > > WEHI acknowledges the Wurundjeri people of the Kulin Nation as the > traditional owners of the land where our campuses are located and the > continuing connection to country and community. > > Private and confidential > The content of this e-mail and any attachments may be private and > confidential, intended only for use of the individual or entity named. If > you are not the intended recipient of this message you must not read, > forward, print, copy, disclose, use or store in any way the information > this e-mail or any attachment contains. If you are not the intended > recipient, please notify the sender immediately and delete or destroy all > copies of this e-mail and any attachment. > > [[alternative HTML version deleted]] > > _______________________________________________ > Bioc-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/bioc-devel > -- The information in this e-mail is intended only for the ...{{dropped:18}} _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel