Please add your SSH keys and you’ll gain access to your package. Once you get access, change the maintainer email address in the DESCRIPTION file of the package.
Best, Nitesh Turaga Scientist II, Department of Data Science, Bioconductor Core Team Member Dana Farber Cancer Institute > On Jul 27, 2021, at 10:09 AM, Mattia Chiesa <mattia.chi...@hotmail.it> wrote: > > Yes I'm still using my istitutional mail. I've just activated the Bioc > Credintials. > Da: Nitesh Turaga <nturaga.b...@gmail.com> > Inviato: martedì 27 luglio 2021 16:01 > A: Mattia Chiesa <mattia.chi...@hotmail.it> > Oggetto: Re: [Bioc-devel] Bioconductor package DaMiRseq > > Hi > > I guess the question is are you still using the email I referred to in the > previous email? Do you still have access to it? > > If so, you can activate your BiocCredentials account with that. > > Nitesh Turaga > Scientist II, Department of Data Science, > Bioconductor Core Team Member > Dana Farber Cancer Institute > > > On Jul 27, 2021, at 9:47 AM, Mattia Chiesa <mattia.chi...@hotmail.it> wrote: > > > > Sorry, but I really do not remember. Probably Yes! when we moved from SVN > > to GIT, I used my istitutional mail. However, I have never had problems in > > the past updating my packages by GitBash. > > How can I fix it now? > > Thanks Nitesh > > Mattia > > > > > > > > Da: Nitesh Turaga <nturaga.b...@gmail.com> > > Inviato: martedì 27 luglio 2021 15:38 > > A: Mattia Chiesa <mattia.chi...@hotmail.it> > > Cc: bioc-devel@r-project.org <bioc-devel@r-project.org> > > Oggetto: Re: [Bioc-devel] Bioconductor package DaMiRseq > > > > Hi > > > > Are you using mattia.chi...@cardiologicomonzino.it to activate your > > BiocCredentials account? > > > > It seems this email is not the same as the one on the maintainer on the > > DESCRIPTION file of the package. > > > > Best, > > > > Nitesh > > > > Nitesh Turaga > > Scientist II, Department of Data Science, > > Bioconductor Core Team Member > > Dana Farber Cancer Institute > > > > > On Jul 27, 2021, at 9:25 AM, Mattia Chiesa <mattia.chi...@hotmail.it> > > > wrote: > > > > > > Dear all, > > > I need to update my package > > > (DaMiRseq<https://www.bioconductor.org/packages/release/bioc/html/DaMiRseq.html>) > > > in order to fix a bug that makes the package fail in devel and release. > > > I tried, as usual, to pull the latest version of package with: > > > git pull upstream master > > > but a connection error occurs: > > > ssh_exchange_identification: read: Connection reset by peer > > > fatal: Could not read from remote repository. > > > Please make sure you have the correct access rights > > > and the repository exists. > > > > > > I asked to Lori who kindly invites me to write you. What should I do? > > > In addition, I cannot activate the Bioconductor Git Credentials, even > > > though I mantain the package since 2017. > > > > > > Thanks in advance, > > > Mattia > > > > > > > > > ________________________________ > > > Da: Kern, Lori <lori.sheph...@roswellpark.org> > > > Inviato: marted� 27 luglio 2021 14:29 > > > A: Mattia Chiesa <mattia.chi...@hotmail.it> > > > Oggetto: Re: Bioconductor package DaMiRseq > > > > > > Regardless of whether it stems from a dependency package or not, your > > > package is still failing in release and devel which is problematic. If > > > the change is intentional from a dependent package, you would still have > > > to modify your code. If you find it is from a dependent package and > > > consider it a bug, I encourage you to reach out to their maintainer > > > directly as well. > > > > > > Please ask further git access issues on bioc-devel@r-project.org mailing > > > list as there are dedicated members of the team to assist with access. To > > > start, make sure you have a valid ssh key on the computer you are using, > > > and that the key is uploaded to the git credentials app. If you have not > > > activated the git credentials app, be sure to activate your account > > > first. Links to the app and other useful git workflow can be found here: > > > http://bioconductor.org/developers/how-to/git/new-package-workflow/ > > > > > > Cheers, > > > > > > > > > > > > > > > > > > Lori Shepherd > > > > > > Bioconductor Core Team > > > > > > Roswell Park Comprehensive Cancer Center > > > > > > Department of Biostatistics & Bioinformatics > > > > > > Elm & Carlton Streets > > > > > > Buffalo, New York 14263 > > > > > > ________________________________ > > > From: Mattia Chiesa <mattia.chi...@hotmail.it> > > > Sent: Tuesday, July 27, 2021 5:06 AM > > > To: Kern, Lori <lori.sheph...@roswellpark.org> > > > Subject: R: Bioconductor package DaMiRseq > > > > > > Dear Lori, > > > Since I haven't modified DaMiRseq for several months, I think the the > > > problem could be related to some Damirseq dependencies. > > > Anyway, I tried to go deep into the problem, but when I type: > > > git pull upstream master > > > a connection error occurs: > > > ssh_exchange_identification: read: Connection reset by peer > > > fatal: Could not read from remote repository. > > > Please make sure you have the correct access rights > > > and the repository exists. > > > > > > It's the first time I have experinced this problem. What should I do? > > > Thanks In advance. > > > Mattia > > > > > > > > > ________________________________ > > > Da: Kern, Lori <lori.sheph...@roswellpark.org> > > > Inviato: luned� 26 luglio 2021 16:55 > > > A: mattia.chi...@hotmail.it <mattia.chi...@hotmail.it> > > > Oggetto: Bioconductor package DaMiRseq > > > > > > We would like to bring to your attention that your package is failing to > > > build > > > or check on our release and devel build machines: > > > > > > Devel: > > > http://bioconductor.org/checkResults/3.14/bioc-LATEST/<http://secure-web.cisco.com/1UyHFFpElhlwoJASYNWNnZo294YfOAS2eA-p2cjmz_DSDOF7yfSSvnTsaWfgpR1F03jqoFKgAspBBEeYNfj1PZhObI9jNDtfIEciWCb5icLfNgkIPsjNScxTtUrhAiUJfpwX1edKaYyjjfRmcH0tpo8_bG7M1111bqZWqkyL1PcWBQwLbjU_fO4UKLxjBmK_VXNwz6SsMCrYCO27DgHBRWvvQi5im5uzCiGg1HlXwSSVi_1Y5fDp8kh52CbA_eo7SuaKaCcjsfEn5qVvTrl6YIlBCANzv2HubDATSyRHIu9nGNZG7mF3Ky8x4fk2dXP45/http%3A%2F%2Fbioconductor.org%2FcheckResults%2F3.14%2Fbioc-LATEST%2FCHETAH%2F>DaMiRseq > > > > > > Release: > > > http://bioconductor.org/checkResults/3.13/bioc-LATEST/<http://secure-web.cisco.com/1h7aSKHWtsfb4cOI13Zh8EU4a5W856Zce40L3uyRNdZTtbeGJQMra08tCbRLlaKugtrt2IECy6CVe6neRyat4TcRkKG4IEZyrSEipziS7yH_RNNvEAkRC8zauoM6Ai7f_9UZojDR7tXXczshLqKDLZteLqLDX9baox4e-VZG8wMfuKwpTvE6cNGtDHFMEZ3rzhOR1IT3M_3xSYbknmx0Q71qZxihn2YtiYhjU4Up9pe4bXUjhWRxl6LOhqp9PgND-GKfgV5YeyM3XFZKfynGIEcs8lF-8eZl1GbgEzIcKHUJ1FupgfLANKtUF7v_ibzB6/http%3A%2F%2Fbioconductor.org%2FcheckResults%2F3.13%2Fbioc-LATEST%2FCHETAH%2F>DaMiRseq > > > > > > Would you mind taking a look at this? Don't hesitate to ask on the > > > bioc-devel mailing list if you have any question or need help. > > > > > > This is very problematic. If no action is taken over the next few weeks > > > we will begin the deprecation process for your package. We appreciate > > > your assistance on pushing changes to remedy these errors. > > > > > > > > > > > > > > > Lori Shepherd > > > > > > Bioconductor Core Team > > > > > > Roswell Park Comprehensive Cancer Center > > > > > > Department of Biostatistics & Bioinformatics > > > > > > Elm & Carlton Streets > > > > > > Buffalo, New York 14263 > > > > > > This email message may contain legally privileged and/or confidential > > > information. If you are not the intended recipient(s), or the employee or > > > agent responsible for the delivery of this message to the intended > > > recipient(s), you are hereby notified that any disclosure, copying, > > > distribution, or use of this email message is prohibited. If you have > > > received this message in error, please notify the sender immediately by > > > e-mail and delete this email message from your computer. Thank you. > > > > > > This email message may contain legally privileged and/or confidential > > > information. If you are not the intended recipient(s), or the employee or > > > agent responsible for the delivery of this message to the intended > > > recipient(s), you are hereby notified that any disclosure, copying, > > > distribution, or use of this email message is prohibited. If you have > > > received this message in error, please notify the sender immediately by > > > e-mail and delete this email message from your computer. Thank you. > > > > > > [[alternative HTML version deleted]] > > > > > > _______________________________________________ > > > Bioc-devel@r-project.org mailing list > > > https://stat.ethz.ch/mailman/listinfo/bioc-devel _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
