On 07/22/2011 07:40 AM, Jane Merlevede wrote:
Hello,
I have used DESeq for gene differential expression analysis and I would like
to use DEXSeq now for exon differential expression analysis.
The point is that the library DEXSeq seems to be available only in R version
2.14.0 (unstable). I am working on Linux (CentOS), with R version 2.13.0. I
have not found this R version 2.14.0 for Linux... Finally, I cannot use
DEXSeq.
I would like to know if DEXSeq will be soon available in R version 2.13.0.
Or is the only solution to work with Windows?
As Sean mentions, this requires R-devel. It is not that difficult to
build R from source on Linux, see sections 1 and 2 of
http://cran.fhcrc.org/doc/manuals/R-admin.html
The source code is available here
http://cran.fhcrc.org/sources.html
you are looking for R-devel.tar.gz
Martin
Thank you for your help,
Jane Merlevède
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