Ketil Malde <[email protected]> writes: > I've run into something...troublesome when using the samtools library. > I've written a function, left_links, that takes an IdxHandle, reads all > matches in the region (0,350), and filters out just the ones that point > "left". Or so I thought.
My own fault, really. My guess is that IdxHandle contains a bunch of state, and that it doesn't really go down well with lazy reading from a region of the Bam file. It /seems/ that strictly evaluating the list of Bam1's solves the problem. -k -- If I haven't seen further, it is by standing in the footprints of giants _______________________________________________ Biohaskell mailing list [email protected] http://malde.org/cgi-bin/mailman/listinfo/biohaskell
