I'm triyng to get the reverse complement from a sequence with gaps (represented
as ':'), but biojava thow an IllegalSymbolException, is this a bug or what is
the symbol to represent gaps in biojava ?
Here is the error.
org.biojava.bio.symbol.IllegalSymbolException: This tokenization doesn't
contain character: ':'
at
org.biojava.bio.seq.io.CharacterTokenization.parseTokenChar(CharacterTokenization.java:175)
at
org.biojava.bio.seq.io.CharacterTokenization$TPStreamParser.characters(CharacterTokenization.java:246)
at
org.biojava.bio.symbol.SimpleSymbolList.<init>(SimpleSymbolList.java:178)
at org.biojava.bio.seq.DNATools.createDNA(DNATools.java:204)
Greetings
Janier
--
Universidad de las Ciencias Informáticas
Janier J. Ramírez Landaburo
Facultad - 6
Tel-837-3121
http://www.uci.cu
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