Dear Dong, >From what I know the ‘inter-atlas_deformation_maps’ transforming fsaverage( num vertices: 163842) to PALS (84K) or CONTE69(164K). From what I see fsaverage5: (num vertices: 10242) has less vertices which I think it is not possible to use those transformation files. Donna or David may suggest a solution. My solution would be to regenerate everything on fsaverage then transform them to caret Conte69 space.
Best Rouhi Best Regards Rouhollah Abdollahi *Institut für Neurowissenschaften und Medizin (INM-3)* Forschungszentrum Jülich Leo-Brandt-Straße 52425 Jülich, GermanyTel: +49 2461 61-9324 On Tue, Jul 5, 2016 at 4:37 AM, Dong Haoming <dongnan...@163.com> wrote: > Hi everyone, > > I am a newcomer to the caret and have some questions about the > transformation from Freesurfer files to the caret files. I have some fmri > maps processed by Freesurfer and try to transform them to the caret space. > I have found some previous mails about this issue: > http://www.mail-archive.com/caret-users%40brainvis.wustl.edu/msg02914.html. > it is mentioned that the ‘inter-atlas_deformation_maps’ required for the > transformation. However, I can’t access the SumsDB database, is there any > solution to download these files? Besides, my fmri maps were generated in > fsaverage5 space, is there a deformation map for the fsaverage5 > transformation? > > Many thanks! > > Dong > > > > _______________________________________________ > caret-users mailing list > caret-users@brainvis.wustl.edu > http://brainvis.wustl.edu/mailman/listinfo/caret-users > >
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