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It might have a mixture of bash and csh syntax (I haven't really had time
to look). To set environment variables in bash, you should replace
constructs like
setenv FOO bar
with
export FOO=bar
and things like
alias foo bar
with
alias foo=bar
There is a great bash scripting resource here:
http://www.tldp.org/LDP/abs/html/
and I've colated some other unix links here:
http://chemistry.ucsc.edu/%7Ewgscott/xtal/unix.html
HTH,
bill
On Thu, 20 Apr 2006, Patrick G. Shaw wrote:
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I changed it and ran it in csh and now I get
: Command not found.
: Command not found.
/usr/local/xtal/ccp4-6.0/bin: Permission denied.
: Command not found.
: Command not found.
TITLE: Command not found.
: Command not found.
Too many )'s.
and I know that I have permission in the /usr/local/xtal/ccp4-6.0/bin directory
so I'm not sure what is up with that.
thanks
Quoting Jim Pflugrath <[EMAIL PROTECTED]>:
setenv is a c-shell command and not a bash shell command.
change the first line from
#!/bin/bash
to
#!/bin/csh
and see what happens.
Jim
On Thu, 20 Apr 2006, Patrick G. Shaw wrote:
