On 06/12/11 22:10, Saugata Hazra wrote:

I'm sorry if its a silly question. I used to use "O" and recently started working with "COOT". I am wondering how to make covalent bond in coot, between a modified substrate and regular protien residue. I can not figure out how to make the bond.




You can't.  There is no user-control over the bonding.

It sounds to me that you don't want to make a bond anyway. You can make a LINK if you like (Extensions->Modelling) but that is not the same thing.

Paul.


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