You do not need anisoonly. You need bref only. If input pdb has aniso card then 
refmac will assume that mixed refinement should be done. If you want to add 
aniso for some of the atoms then you can use instructions like:

brefine mixed aniso residue 100 A atoms FE S C*


Please have a look documentation from the our LMB site for further details.

Regards
Garib


On 5 Sep 2013, at 15:50, hari jayaram wrote:

> Thanks Garib for the new version.
> 
> For only an anisotropic B refinement ..what are the keywords. The one below 
> seems to work
> refi -
>     type REST -
>     resi MLKF -
>     meth CGMAT -
>     bref anisoonly
> ncyc 5
> 
> As far as Bill Scotts question does coot not pick up refmac5 and libcheck 
> from $CCP4_BIN ?
> 
> Thanks
> Hari
> 
> 
> 
> On Thu, Sep 5, 2013 at 10:15 AM, William G. Scott <wgsc...@ucsc.edu> wrote:
> On Sep 4, 2013, at 2:57 PM, Garib N Murshudov <ga...@mrc-lmb.cam.ac.uk> wrote:
> 
> > You may need to use the latest available version (5.8) from our LMB site
> 
> Hi Garib:
> 
> Would it be possible to add a link for the source code, so this could also be 
> used with Coot?
> 
> Thanks.
> 
> Bill
> 

Dr Garib N Murshudov
Group Leader, MRC Laboratory of Molecular Biology
Francis Crick Avenue
Cambridge Biomedical Campus
Cambridge 
CB2 0QH UK
Email: ga...@mrc-lmb.cam.ac.uk 
Web http://www.mrc-lmb.cam.ac.uk, 
http://www2.mrc-lmb.cam.ac.uk/groups/murshudov/










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