Hi Ingo,
I tried replacing the loggraph script and also running the old ccp4 in its
entirety on the same machine
Both of them popup the blank graph window and then promptly crash with the
message we had posted.
Can anyone confirm if they are using Redhat 6.5 and blt with loggraph
Thanks for your suggestion
Hari
On Friday, April 4, 2014, Ingo P. Korndoerfer <korndoer...@crelux.com>
wrote:
> hi,
>
> i belive i have for quite a while simply copied loggraph from the last
> working installation into the active version of ccp4.
>
> might be worth a shot ...
>
> ingo
>
>
> hari jayaram wrote:
>
> Hi all ..
> loggraph seems to be broken on Redhat 6.5 . It may be a "blt" error. Can
> someone confirm that they can get loggraph to work on Redhat Enterprise 6.5
> with the ccp4 provided binaries.
>
> Sadly Redhat nor Activestate provide "blt" replacements
>
> In all cases the loggraph starts a blank window ready to plot a graph
> and then fails with the error
>
> "Error in startup script: syntax error in expression "10 11 12 + 12":
> extra tokens at end of expression
> while executing
> "expr [string trim $ele] + $data(NCOLUMNS) "
> (procedure "extract_tables_from_GRAPH" line 44)
> invoked from within
> "extract_tables_from_$filetype $input $arrayname"
> (procedure "extract_tables_from_file" line 31)
> invoked from within
> "extract_tables_from_file $system(SCRIPT) $system(FORMAT) data"
> invoked from within
> "if { $system(SCRIPT) != "" } {
> if { ![ElementExists system FORMAT] || $system(FORMAT) == "" } {
> set system(FORMAT) [GetFileFormat $system(SCRI..."
> (file
> "/home/yong.tang/ccp4_root/ccp4-6.4.0/share/ccp4i/loggraph/loggraph.tcl"
> line 2324)
> invoked from within
> "source [file join $env(CCP4I_TOP) loggraph loggraph.tcl]"
> (file
> "/home/yong.tang/ccp4_root/ccp4-6.4.0/share/ccp4i/bin/loggraph.tcl" line 83)
> "
>
> Sadly We cannot go back to using Ubuntu where this was working.
>
> The CCP4 provided blt, bltsh and wish binaries seem to work fine ..its
> only loggraph that fails .
>
> We are using the current ccp4 installed yesterday.
>
> I also tried using Activestate wish and combining it with ccp4 provided
> bltsh ..but in that case I get the error :
>
> package require blt
>
> Thanks
>
> Hari ( and Yong)
>
>
>
>
> On Wed, Apr 2, 2014 at 2:33 PM, Yong Tang <liutan...@gmail.com> wrote:
>
> Hello All,
>
> Further to my earlier email..I am running ccp4 6.4 , on 64 bit Redhat
> Linux 6.5
>
> I cannot see loggraphs with View-Files-From-Job - View Log Graphs--
>
> That throws an error in the shell. This is the same error I see when
> coot finishes refmac5 as well.
> It seems that the loggraph tcl script is broken somehow.
>
> Any ideas on how to fix.
> Thank you for your help
>
>
> Yong
>
>
> Top level CCP4 directory is /home/yong/ccp4_root/ccp4-6.4.0
> Using CCP4 programs from /home/yong/ccp4_root/ccp4-6.4.0/bin
> Error in startup script: syntax error in expression "10 11 12 + 12": extra
> tokens at end of expression
> while executing
> "expr [string trim $ele] + $data(NCOLUMNS) "
> (procedure "extract_tables_from_GRAPH" line 44)
> invoked from within
> "extract_tables_from_$filetype $input $arrayname"
> (procedure "extract_tables_from_file" line 31)
> invoked from within
>
> --
> CRELUX GmbH
>
> Dr. Ingo Korndoerfer
> Head of Crystallography
>
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