I would first look at the dataset stats and define a resolution range
mainly based on I/sigI >1 and cc1/2 >0.5. Based on this, would take the
good resolution datasets only.

Further for comparing these mtz after refinement, I personally prefer
looking at the electron density maps rather than just going with R values.
For this I normally select two or three regions where I see weak density
map and then compare different datasets.

Shipra

On Wed, 27 Oct 2021 at 9:15 PM, Murpholino Peligro <murpholi...@gmail.com>
wrote:

> Let's say I ran autoproc with different combinations of options for a
> specific dataset, producing dozens of different (but not so different) mtz
> files...
> Then I ran phenix.refine with the same options for the same structure but
> with all my mtz zoo
> What would be the best metric to say "hey this combo works the best!"?
> R-free?
> Thanks
>
> M. Peligro
>
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