A spectre is haunting structural biology - it is the spectre of the PDBx
format.
We at CCP4 are interested in providing tools that are equivalents of
those that one might have trivially made with utilities such as grep or sed.
For example:
delete the hydrogen atoms
extract the hydrogen atoms
extract the SD of MET
find the atoms with B-factors greater than 100.0
So, what useful tool have you made can that works because it based on
the PDB format - that (of course) doesn't work with PDBx?
Thanks,
Paul.
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