May I point you towards the shape similarity search available at the
rcsb.org site?
https://www.rcsb.org/news/feature/63933da0e543b6038c4fc5dd
The news suggests that you need to upload via URL - but there is a file
upload option in the source pull down.
On 5/22/24 5:03 PM, Das, Abhinaba wrote:
Dear community,
Is it possible to conveniently search the PDB for specific geometrical
shapes, disregarding the input residues and specifically focusing on
finding similar topologies?
Thanks in advance
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