Hello,
I would like to take this opportunity to announce the release of our new web-tool, FoldScript (https://foldscript.ibcp.fr/), which complements our web-tool ESPript. FoldScript allows to analyze and to filter with experimental results (ie residues known to be involved in intermolecular interfaces) the list of AI-models generated by Alphafold3 (currently 5 models versus 25 with Alphafold-Multimers). We created this web-service because we observed that the top-ranked model supplied by AF3 is not necessarily the most “relevant” one, and we wanted to quickly compare models supplied by AF3, Alphafold-multimer, EMSfold, Rosettafold... As has been related by others, we observe that AI-predicted hetero-oligomeric structures have to be taken with caution.
Best
patrice


Le 2024-10-05 15:48, Jon Cooper a écrit :
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Just wondering if anyone has any comments on, or concrete experiences with, alphafold3. I might try to cobble something together for Crystallography News (he says, having missed the main Nature paper, ahem). My googling has only given me hype and gripe so far ;-0 ;-0

Best wishes, Jon Cooper.
jon.b.coo...@protonmail.com

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