Dear all,
From last few days i am working with qsar package of cdk.
I have builded the jar from source. while doing so I am getting few error.
Previously (when i was using the pre builded jar) this error was not their.
1)
//////////////////////////////////////////////////////////////////////////////////////////////////////////////////
Exception in thread "AWT-EventQueue-0" java.lang.NoClassDefFoundError:
Jama/Matrix
at
org.openscience.cdk.qsar.descriptors.molecular.BCUTDescriptor.calculate(
BCUTDescriptor.java:295)
at Data.QSARCal.calculate(QSARCal.java:75)
///////////////////////////////////////////////////////////
2) I think this class is removed in the latest version.
java.lang.ClassNotFoundException:
org.openscience.cdk.qsar.descriptors.molecular.ConnectivityOrderOneDescriptor
at java.net.URLClassLoader$1.run(URLClassLoader.java:200)
///////////////////////////////////////////////////////////////
3) again jama/Matrix error
Exception in thread "AWT-EventQueue-0" java.lang.NoClassDefFoundError:
Jama/Matrix
org.openscience.cdk.qsar.descriptors.molecular.MomentOfInertiaDescriptor.calculate
(MomentOfInertiaDescriptor.java:201)
at Data.QSARCal.calculate(QSARCal.java:75)
at CWin.CView.OnQsar(CView.java:552)
/////////////////////////////////////////////////////////////////////
4) i think this class is also removed
java.lang.ClassNotFoundException:
org.openscience.cdk.qsar.descriptors.molecular.ConnectivityOrderZeroDescriptor
at java.net.URLClassLoader$1.run(URLClassLoader.java:200)
also ConnectivityOrderOneDescriptor is giving the same error.
//////////////////////////////////////////////////////////////////////
5) AromaticAtom and AromaticBond Count descriptor are coming zero always.
****************************************************************************************
Please help me to remove these errors.
--
********************************
sushil ronghe
Center of Pharmacoinformatics
India
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