On Thu, Sep 10, 2009 at 9:58 AM, Vincent Le
Guilloux<[email protected]> wrote:
> - Is there any notable difference between SpanningTree and SSSR ? In term of
> performance & algorithm.

The former only determines if an atom/bond is in a ring... but does
not create sets.

> - Just for my curiosity, is there a particular reason why atom type
> configuration & aromaticity detection are not performed automatically when a
> molecule is loaded ? In a single method that would do the job: percieve atom
> types, set all existing flags and so on...

It is not done upon loading, as one wants to read what's in the file,
not what the CDK (i.e. some CDK algorithm) thinks is in the file.

Egon

--
Post-doc @ Uppsala University
Blog: http://chem-bla-ics.blogspot.com/
PubList: http://www.citeulike.org/user/egonw/tag/papers

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