Messages by Date
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2012/07/29
Re: [Cdk-user] MOL to SVG, "natural" size
Egon Willighagen
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2012/07/22
[Cdk-user] Intro into Nightly: computer-aided code evaluation
Egon Willighagen
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2012/07/19
[Cdk-user] [discuss] GeometryTools.has2DCoordinates(IAtomContainer)
John May
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2012/07/19
Re: [Cdk-user] [Cdk-devel] [discuss] GeometryTools.has2DCoordinates(IAtomContainer)
Egon Willighagen
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2012/07/18
Re: [Cdk-user] [Cdk-devel] [discuss] GeometryTools.has2DCoordinates(IAtomContainer)
Rajarshi Guha
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2012/07/15
Re: [Cdk-user] Summary of the first online (developers) CDK meeting
Egon Willighagen
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2012/07/15
[Cdk-user] Summary of the first online (developers) CDK meeting
Egon Willighagen
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2012/07/01
Re: [Cdk-user] chiral SMILES
Egon Willighagen
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2012/06/25
[Cdk-user] chiral SMILES
lochana menikarachchi
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2012/06/12
Re: [Cdk-user] ALOGP descriptor
Rajarshi Guha
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2012/06/01
Re: [Cdk-user] ALOGP Descriptor
Egon Willighagen
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2012/06/01
Re: [Cdk-user] ALOGP Descriptor
Nina Jeliazkova
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2012/06/01
Re: [Cdk-user] ALOGP Descriptor
kevin.lawson
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2012/06/01
Re: [Cdk-user] ALOGP Descriptor
Nina Jeliazkova
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2012/05/23
[Cdk-user] Stereochemistry and overlapping bonds
Leandro D. Figueira
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2012/05/17
Re: [Cdk-user] Padel_Estate_Descriptors
lochana menikarachchi
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2012/05/16
[Cdk-user] Padel_Estate_Descriptors
lochana menikarachchi
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2012/05/14
[Cdk-user] E-State
lochana menikarachchi
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2012/05/14
Re: [Cdk-user] Your feedback please: finding double bond locations
Loren Lenzen
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2012/05/14
Re: [Cdk-user] [Bioclipse-devel] Your feedback please: finding double bond locations
Nina Jeliazkova
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2012/05/14
Re: [Cdk-user] [Bioclipse-devel] Your feedback please: finding double bond locations
Egon Willighagen
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2012/05/14
Re: [Cdk-user] [Bioclipse-devel] Your feedback please: finding double bond locations
Christoph Steinbeck
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2012/05/14
[Cdk-user] Your feedback please: finding double bond locations
Egon Willighagen
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2012/05/05
Re: [Cdk-user] updated atom type specification
Egon Willighagen
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2012/05/04
Re: [Cdk-user] updated atom type specification
Egon Willighagen
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2012/05/04
Re: [Cdk-user] Cdk-user Digest, Vol 72, Issue 4
Egon Willighagen
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2012/05/04
Re: [Cdk-user] Cdk-user Digest, Vol 72, Issue 4
Syed Asad Rahman
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2012/05/04
[Cdk-user] updated atom type specification
Egon Willighagen
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2012/05/03
Re: [Cdk-user] [Cdk-devel] Generating 3D coordinates from 2D molfile
Szisz Daniel
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2012/05/03
[Cdk-user] MOL to SVG, "natural" size
Андрей Парамонов
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2012/05/03
[Cdk-user] Generating 3D coordinates from 2D molfile
Mas Kot
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2012/05/02
[Cdk-user] MDLV3000Reader
kevin.lawson
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2012/05/01
Re: [Cdk-user] MDLV3000Reader
Egon Willighagen
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2012/05/01
Re: [Cdk-user] [Cdk-devel] C-N MMFF94 bond length in aliphatic amines
Egon Willighagen
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2012/05/01
[Cdk-user] C-N MMFF94 bond length in aliphatic amines
Szisz Daniel
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2012/04/28
[Cdk-user] CDK used in a JACS paper
Egon Willighagen
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2012/04/26
Re: [Cdk-user] MDLV3000Reader
kevin.lawson
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2012/04/26
Re: [Cdk-user] Similarity cutoff
Rajarshi Guha
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2012/04/26
[Cdk-user] MDLV3000Reader
kevin.lawson
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2012/04/26
Re: [Cdk-user] cinfony and numpy?
Egon Willighagen
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2012/04/26
Re: [Cdk-user] cinfony and numpy?
Noel O'Boyle
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2012/04/26
[Cdk-user] cinfony and numpy?
Egon Willighagen
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2012/04/25
[Cdk-user] Similarity cutoff
Jochen Schreiber
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2012/04/08
[Cdk-user] ModelBuilder3D status - possible TODOs
Szisz Daniel
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2012/04/07
Re: [Cdk-user] ModelBuilder3D test - failures
Egon Willighagen
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2012/04/07
Re: [Cdk-user] [Cdk-devel] ModelBuilder3D bug report - amide handling
Egon Willighagen
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2012/04/05
Re: [Cdk-user] Generating images and image boarder
Joos Kiener
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2012/04/05
[Cdk-user] ModelBuilder3D bug report - amide handling
Szisz Daniel
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2012/04/04
Re: [Cdk-user] Generating images and image boarder
Joos Kiener
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2012/04/04
Re: [Cdk-user] Generating images and image boarder
Egon Willighagen
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2012/04/04
Re: [Cdk-user] Generating images and image boarder
Christoph Steinbeck
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2012/04/04
Re: [Cdk-user] Generating images and image boarder
Egon Willighagen
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2012/04/04
[Cdk-user] Generating images and image boarder
Joos Kiener
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2012/04/02
Re: [Cdk-user] sdf2Excel
Joos Kiener
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2012/04/02
Re: [Cdk-user] sdf2Excel
Mark Southern
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2012/04/01
[Cdk-user] sdf2Excel
lochana menikarachchi
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2012/04/01
[Cdk-user] last call for reviews: 3434538 Makes the reaction module independent from the data module
Egon Willighagen
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2012/03/31
[Cdk-user] Fwd: [BlueObelisk-discuss] Request for Information about Code libraries for CML
Egon Willighagen
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2012/03/30
Re: [Cdk-user] Rendering an image of a chemical, and highlighting elements
Vance -
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2012/03/30
Re: [Cdk-user] Rendering an image of a chemical, and highlighting elements
Patrik Rydberg
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2012/03/30
Re: [Cdk-user] Rendering an image of a chemical, and highlighting elements
Rajarshi Guha
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2012/03/30
Re: [Cdk-user] Rendering an image of a chemical, and highlighting elements
Vance -
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2012/03/30
Re: [Cdk-user] ModelBuilder3D test - failures
Rajarshi Guha
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2012/03/30
Re: [Cdk-user] ModelBuilder3D test - failures
Martin Guetlein
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2012/03/27
Re: [Cdk-user] Rendering an image of a chemical, and highlighting elements
Patrik Rydberg
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2012/03/27
Re: [Cdk-user] Rendering an image of a chemical, and highlighting elements
Vance -
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2012/03/26
Re: [Cdk-user] Working with CML
Vance -
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2012/03/26
Re: [Cdk-user] CDK Descriptors Concurrent Modification Exception
Egon Willighagen
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2012/03/26
Re: [Cdk-user] Working with CML
Egon Willighagen
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2012/03/26
Re: [Cdk-user] Working with CML
Vance -
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2012/03/26
[Cdk-user] ModelBuilder3D test - failures
Szisz Daniel
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2012/03/25
[Cdk-user] tip for the making patches: no longer use IMolecule
Egon Willighagen
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2012/03/25
Re: [Cdk-user] Rendering an image of a chemical, and highlighting elements
Egon Willighagen
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2012/03/24
Re: [Cdk-user] Rendering an image of a chemical, and highlighting elements
Vance -
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2012/03/24
Re: [Cdk-user] Working with CML
Vance -
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2012/03/24
Re: [Cdk-user] Rendering an image of a chemical, and highlighting elements
Joos Kiener
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2012/03/24
Re: [Cdk-user] Working with CML
Egon Willighagen
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2012/03/23
[Cdk-user] Rendering an image of a chemical, and highlighting elements
Vance -
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2012/03/23
Re: [Cdk-user] Molecular flexibility analysis
Joos Kiener
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2012/03/23
Re: [Cdk-user] CDK Descriptors Concurrent Modification Exception
Rajarshi Guha
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2012/03/23
[Cdk-user] CDK Descriptors Concurrent Modification Exception
lochana menikarachchi
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2012/03/23
[Cdk-user] IMPORTANT: cdk-1.4.x no longer compatible with master
Egon Willighagen
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2012/03/23
Re: [Cdk-user] Molecular flexibility analysis
Egon Willighagen
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2012/03/21
Re: [Cdk-user] Working with CML
Vance -
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2012/03/21
Re: [Cdk-user] Working with CML
Vance -
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2012/03/21
Re: [Cdk-user] Working with CML
Egon Willighagen
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2012/03/20
Re: [Cdk-user] Deduce Bond System Tool
Egon Willighagen
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2012/03/20
Re: [Cdk-user] Deduce Bond System Tool
Egon Willighagen
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2012/03/20
[Cdk-user] Working with CML
Vance -
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2012/03/20
Re: [Cdk-user] Split multiple Structures in 1 AtomContainer into multiple AtomContainers
Nina Jeliazkova
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2012/03/20
Re: [Cdk-user] Split multiple Structures in 1 AtomContainer into multiple AtomContainers
Nina Jeliazkova
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2012/03/20
[Cdk-user] Split multiple Structures in 1 AtomContainer into multiple AtomContainers
Joos Kiener
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2012/03/17
Re: [Cdk-user] Deduce Bond System Tool
kevin.lawson
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2012/03/17
Re: [Cdk-user] Deduce Bond System Tool
Egon Willighagen
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2012/03/17
Re: [Cdk-user] Deduce Bond System Tool
Egon Willighagen
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2012/03/16
Re: [Cdk-user] Deduce Bond System Tool
kevin.lawson
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2012/03/15
Re: [Cdk-user] Deduce Bond System Tool
Egon Willighagen
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2012/03/15
Re: [Cdk-user] Deduce Bond System Tool
kevin.lawson
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2012/03/15
Re: [Cdk-user] Deduce Bond System Tool
Egon Willighagen
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2012/03/13
Re: [Cdk-user] Molecule properties, MDLWriter
Egon Willighagen
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2012/03/13
[Cdk-user] Molecule properties, MDLWriter
Jean-Marc Nuzillard
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2012/03/12
Re: [Cdk-user] Molecule properties, MDLWriter
Christoph Steinbeck
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2012/03/12
[Cdk-user] Molecule properties, MDLWriter
Jean-Marc Nuzillard
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2012/03/05
Re: [Cdk-user] accessing descriptors in cdk?
Villu Ruusmann
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2012/03/05
[Cdk-user] accessing descriptors in cdk?
Nick Vandewiele
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2012/02/21
Re: [Cdk-user] aromaticity not detected
Egon Willighagen
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2012/02/21
Re: [Cdk-user] aromaticity not detected
Nina Jeliazkova
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2012/02/21
Re: [Cdk-user] aromaticity not detected
Martin Guetlein
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2012/02/21
Re: [Cdk-user] aromaticity not detected
Egon Willighagen
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2012/02/21
[Cdk-user] aromaticity not detected
Martin Guetlein
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2012/02/19
Re: [Cdk-user] Fragmenting Molecules based on set of rules
Egon Willighagen
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2012/02/19
[Cdk-user] the monolithic jar, or the module jars (was: 13C-NMR Predictor, again)
Egon Willighagen
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2012/02/17
Re: [Cdk-user] IPMolecularLearningDescriptor hangs
Rajarshi Guha
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2012/02/17
[Cdk-user] IPMolecularLearningDescriptor hangs
lochana menikarachchi
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2012/02/13
Re: [Cdk-user] FW: 13C-NMR Predictor, again
Hans Horn
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2012/02/11
Re: [Cdk-user] FW: 13C-NMR Predictor, again
Stefan Kuhn
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2012/02/11
[Cdk-user] 13C-NMR Predictor, again
JEAN-MARC NUZILLARD
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2012/02/10
[Cdk-user] 13C-NMR Predictor
Jean-Marc Nuzillard
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2012/02/09
Re: [Cdk-user] Fragmenting Molecules based on set of rules
Nina Jeliazkova
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2012/02/09
Re: [Cdk-user] Fragmenting Molecules based on set of rules
Rajarshi Guha
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2012/02/09
[Cdk-user] Fwd: [BlueObelisk-discuss] QSAR2012: June, Tallinn (Estonia)
Egon Willighagen
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2012/02/08
[Cdk-user] Fragmenting Molecules based on set of rules
lochana menikarachchi
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2012/02/06
Re: [Cdk-user] framework for storing and searching chemical structures
Joos Kiener
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2012/02/06
Re: [Cdk-user] framework for storing and searching chemical structures
Egon Willighagen
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2012/02/05
[Cdk-user] framework for storing and searching chemical structures
Joos Kiener
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2012/02/04
Re: [Cdk-user] SMARTS [#1] in xml parsing?
Nick Vandewiele
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2012/02/04
Re: [Cdk-user] SMARTS [#1] in xml parsing?
Egon Willighagen
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2012/02/04
Re: [Cdk-user] SMARTS [#1] in xml parsing?
Nick Vandewiele
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2012/02/03
Re: [Cdk-user] SMARTS [#1] in xml parsing?
Rajarshi Guha
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2012/02/03
[Cdk-user] SMARTS [#1] in xml parsing?
Nick Vandewiele
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2012/02/03
Re: [Cdk-user] Help for beginners
Christoph Steinbeck
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2012/02/01
Re: [Cdk-user] Correctness of Fingerprinters and UniversalisomorphismTester
Joos Kiener
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2012/01/30
[Cdk-user] SMILES Aromatic Bond Rendering
Stephan Beisken
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2012/01/24
[Cdk-user] Priyanka Shah added you to BelSU on Academia.edu
Priyanka Shah
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2012/01/22
Re: [Cdk-user] Error after update on ubuntu
Rajarshi Guha
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2012/01/22
[Cdk-user] Fwd: [Cdk-jchempaint] Callback to Javascript from applet on change?
Egon Willighagen
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2012/01/22
Re: [Cdk-user] Error after update on ubuntu
Egon Willighagen
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2012/01/22
Re: [Cdk-user] Abbreviated Amino Acids in SDF
Egon Willighagen
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2012/01/17
[Cdk-user] Abbreviated Amino Acids in SDF
lochana menikarachchi
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2012/01/11
[Cdk-user] 3d structure generation in CDK
Szisz Daniel
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2011/12/29
Re: [Cdk-user] render implicit hydrogens
Egon Willighagen
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2011/12/29
Re: [Cdk-user] formal charges
Egon Willighagen
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2011/12/25
[Cdk-user] Error after update on ubuntu
Jochen Schreiber
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2011/12/25
[Cdk-user] suggestion for GasteigerMarsiliPartialCharges.java
Eric Jang
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2011/12/25
[Cdk-user] formal charges
Eric Jang
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2011/12/25
Re: [Cdk-user] suggestion for GasteigerMarsiliPartialCharges.java
Eric Jang
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2011/12/25
[Cdk-user] render implicit hydrogens
Martin Riese
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2011/12/20
Re: [Cdk-user] Correctness of Fingerprinters and UniversalisomorphismTester
Joos Kiener
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2011/12/19
Re: [Cdk-user] Correctness of Fingerprinters and UniversalisomorphismTester
Joos Kiener
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2011/12/19
Re: [Cdk-user] Correctness of Fingerprinters and UniversalisomorphismTester
Joos Kiener
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2011/12/19
Re: [Cdk-user] Cdk-user Digest, Vol 67, Issue 8
Syed Asad Rahman
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2011/12/19
Re: [Cdk-user] Correctness of Fingerprinters and UniversalisomorphismTester
Egon Willighagen
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2011/12/19
Re: [Cdk-user] Correctness of Fingerprinters and UniversalisomorphismTester
Joos Kiener
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2011/12/18
[Cdk-user] SDF Problem
lochana menikarachchi
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2011/12/18
Re: [Cdk-user] SDF Problem
Egon Willighagen
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2011/12/17
Re: [Cdk-user] SDF Problem
Rajarshi Guha
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2011/12/17
[Cdk-user] SDF Problem
lochana menikarachchi
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2011/12/17
Re: [Cdk-user] Rendering H2O results 0x0 image
Egon Willighagen
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2011/12/16
Re: [Cdk-user] Rendering H2O results 0x0 image
Nina Jeliazkova
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2011/12/16
Re: [Cdk-user] Rendering H2O results 0x0 image
Dmitry Katsubo
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2011/12/16
[Cdk-user] CDK releases...
Egon Willighagen
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2011/12/15
[Cdk-user] Hydrogen labels with subscripts on 2D structure
Steve Darnell
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2011/12/15
Re: [Cdk-user] the file name says it all :)
Rajarshi Guha
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2011/12/14
[Cdk-user] SMILES to molfile with structure - aromatic double bonds lost. fixAromaticBondOrders does nothing?
Stravs, Michael
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2011/12/11
Re: [Cdk-user] if you'd be so kind...
Rajarshi Guha
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2011/12/11
Re: [Cdk-user] [cdk] Typed the iterator, removing the need for casting when used (6e6cf8e)
Egon Willighagen
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2011/12/11
[Cdk-user] review request: iterating IO reader with generics
Egon Willighagen
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2011/12/08
[Cdk-user] Correctness of Fingerprinters and UniversalisomorphismTester
Joos Kiener
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2011/12/03
[Cdk-user] Cinfony 1.1 released
Noel O'Boyle
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2011/11/28
[Cdk-user] Rendering H2O results 0x0 image
Dmitry Katsubo
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2011/11/27
Re: [Cdk-user] PubChem database with search
Rajarshi Guha
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2011/11/27
[Cdk-user] PubChem database with search
Jochen Schreiber
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2011/11/24
Re: [Cdk-user] problem when following rendering tutorial: aromaticity
Joos Kiener
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2011/11/24
Re: [Cdk-user] problem when following rendering tutorial: aromaticity
Egon Willighagen
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2011/11/24
Re: [Cdk-user] problem when following rendering tutorial: aromaticity
Joos Kiener
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2011/11/23
Re: [Cdk-user] problem when following rendering tutorial: aromaticity
Egon Willighagen
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2011/11/23
[Cdk-user] problem when following rendering tutorial: aromaticity
Joos Kiener
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2011/11/22
Re: [Cdk-user] Problem while parsing sdf File
Rajarshi Guha
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2011/11/22
Re: [Cdk-user] Problem while parsing sdf File
Rajarshi Guha
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2011/11/22
Re: [Cdk-user] Problem while parsing sdf File
Jochen Schreiber
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2011/11/22
Re: [Cdk-user] Problem while parsing sdf File
Egon Willighagen
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2011/11/22
Re: [Cdk-user] Problem while parsing sdf File
Jochen Schreiber
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2011/11/22
Re: [Cdk-user] Problem while parsing sdf File
Egon Willighagen
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2011/11/22
[Cdk-user] Problem while parsing sdf File
Jochen Schreiber
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2011/11/19
Re: [Cdk-user] Fwd: [cdk-bugs] Bonds comparison trouble
Nina Jeliazkova
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2011/11/19
Re: [Cdk-user] Fwd: [cdk-bugs] Bonds comparison trouble
Jonathan Alvarsson
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2011/11/18
Re: [Cdk-user] Fwd: [cdk-bugs] Bonds comparison trouble
Nina Jeliazkova
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2011/11/18
Re: [Cdk-user] Fwd: [cdk-bugs] Bonds comparison trouble
Christoph Steinbeck
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2011/11/18
[Cdk-user] Fwd: [cdk-bugs] Bonds comparison trouble
Egon Willighagen
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2011/11/17
[Cdk-user] JChemPaint Applet and Molfiles
Joos Kiener
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2011/11/17
Re: [Cdk-user] Updating Cinfony
Egon Willighagen
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2011/11/17
[Cdk-user] Updating Cinfony
Noel O'Boyle
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2011/11/17
Re: [Cdk-user] PubChem SDF Charges
Egon Willighagen
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2011/11/16
Re: [Cdk-user] PubChem SDF Charges
Rajarshi Guha
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2011/11/16
[Cdk-user] PubChem SDF Charges
lochana menikarachchi
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2011/11/15
Re: [Cdk-user] not working: loading descriptor instances with java web start
Egon Willighagen
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2011/11/15
Re: [Cdk-user] not working: loading descriptor instances with java web start
Martin Guetlein
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2011/11/15
Re: [Cdk-user] not working: loading descriptor instances with java web start
Egon Willighagen
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2011/11/15
Re: [Cdk-user] not working: loading descriptor instances with java web start
Martin Guetlein
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2011/11/15
Re: [Cdk-user] not working: loading descriptor instances with java web start
Nina Jeliazkova