Hi Dmitry,

On Tue, Jan 18, 2011 at 6:09 PM, Dmitry Katsubo
<[email protected]> wrote:
> I think, the parameter should be
> renamed to "BondLength" then, as it controls the [magnitude of] distance
> between atoms.

BondLength suggest to me to be something physical, so more in world
coordinates, rather than screen coordinates...

BTW, in reply to earlier discussions... MDL/Symyx molfiles have
Ångström as unit, though many programs (including CDK/JChemPaint)
often save in screen coordinates instead.

> Zoom in contrast to scale also impacts the size of font used to draw
> atoms. So in this sense zoom is real visual zoom.

Yes, that would be the idea indeed. Zoom is 100% = 1.0 by default.

Egon

-- 
Dr E.L. Willighagen
Postdoctoral Researcher
Institutet för miljömedicin
Karolinska Institutet
Homepage: http://egonw.github.com/
LinkedIn: http://se.linkedin.com/in/egonw
Blog: http://chem-bla-ics.blogspot.com/
PubList: http://www.citeulike.org/user/egonw/tag/papers

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