Hi
I am having problems getting the V3000 SDF reader to work. Code such as:
MDLV2000Reader mfReader = new MDLV2000Reader(new FileReader(new
File(filename)));
ChemFile chemFile = (ChemFile)mfReader.read((ChemObject)new ChemFile());
mfReader.close();
List<IAtomContainer> containersList =
ChemFileManipulator.getAllAtomContainers(chemFile);
works fine with V2000 files but, if I substitute the MDLV3000Reader and try to
open a V3000 sdf file
(several tried from multiple sources), the ChemFile is always Null.
What have I done wrong please?
Best wishes
Kevin
Syngenta Limited, Registered in England No 2710846
Registered Office : Syngenta Limited, European Regional Centre, Priestley Road,
Surrey Research Park, Guildford, Surrey, GU2 7YH, United Kingdom
This message may contain confidential information. If you are not the
designated recipient, please notify the sender immediately, and delete the
original and any copies. Any use of the message by you is prohibited.
------------------------------------------------------------------------------
Live Security Virtual Conference
Exclusive live event will cover all the ways today's security and
threat landscape has changed and how IT managers can respond. Discussions
will include endpoint security, mobile security and the latest in malware
threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/
_______________________________________________
Cdk-user mailing list
[email protected]
https://lists.sourceforge.net/lists/listinfo/cdk-user