On Thu, Apr 26, 2012 at 5:21 PM, <[email protected]> wrote: > BTW I am using cdk-1.4.8. Have also tried the Iterating MDL Reader. This > also fails for V3000 files but works for V2000 files. However, if I use > cdk-1.4.2 then the iterating reader works fine for both V3000 and v2000 > files (whereas MDLV3000Reader still fails when applied as below)
There has been some work on the SDF reader to fix something else, which seemed to have introduced a regression... Can you make a unit test with a dummy SD file? Or send me a test file offline privately? Egon -- Dr E.L. Willighagen Postdoctoral Researcher Department of Bioinformatics - BiGCaT Maastricht University (http://www.bigcat.unimaas.nl/) Homepage: http://egonw.github.com/ LinkedIn: http://se.linkedin.com/in/egonw Blog: http://chem-bla-ics.blogspot.com/ PubList: http://www.citeulike.org/user/egonw/tag/papers ------------------------------------------------------------------------------ Live Security Virtual Conference Exclusive live event will cover all the ways today's security and threat landscape has changed and how IT managers can respond. Discussions will include endpoint security, mobile security and the latest in malware threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/ _______________________________________________ Cdk-user mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/cdk-user
