Yes, perfect. Thank you.

On 24/11/2016 15:08, Marwin Segler wrote:
> Hi Tim,
>
> have a look at the ConnectivityChecker
>
> http://cdk.github.io/cdk/1.5/docs/api/org/openscience/cdk/graph/ConnectivityChecker.html
>
>
> that should do exactly what you want.
>
> Cheers
> Marwin
>
>
>
> On 24 Nov 2016, at 15:04, Tim Dudgeon <tdudgeon...@gmail.com> wrote:
>
>> I'm sure this is easy, but I can't find it.
>>
>> How to break a molecule onto its fragments when it is composed of
>> multiple disconnected parts. e.g. the main molecule and its salt.
>> I was expecting to find something like a
>>
>> IAtomContainer[] getFragments();
>>
>> method in IAtomContainer.
>>
>> Tim
>>
>>
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