Thanks for the help. I eventually figured out that I should be using
ccmrun instead of ccmlogin. The rest of your suggestions are good though,
and I'll try and work them into my script.
- Chris
On Wed, Nov 20, 2013 at 2:22 PM, Rafael Larrosa Jiménez <[email protected]>wrote:
> El Miércoles, 20 de noviembre de 2013 12:25:50 Chris Wailes escribió:
> Hi Chris,
>
> I would try to simplify the test first.
>
> I would execute first in the script :
>
> cd "$PBS_O_WORKDIR"
>
> So it goes to the dir from where you have requested the qsub.
>
> And have the PBS script and the chapel program in the same directory, so
> you
> would do:
>
> qsub chapel_test.pbs
>
> From the same directory that contains paratest.server
>
> Also in some systems home is not accesible from the compute nodes, so, if
> that is your case, you cannot write or read to/from your home fs in the
> compute nodes.
>
> And you should check what ccmlogin does, as it perhaps moves your working
> directory, if it is like ssh, it will left you at home in the new computer,
> after it you should move to the right place...
>
> Greets,
>
> Rafael
>
> > Lydia,
> >
> > >From what I understand the script is waiting to hear back from the
> clients
> >
> > about the tests it has already dispatched before issuing new tests for
> them
> > to run.
> >
> > - Chris
> >
> > On Wed, Nov 20, 2013 at 12:07 PM, Lydia Duncan <[email protected]> wrote:
> > > Hi Chris,
> > >
> > > Does it find files for tests after arrays/johnk? Your run looks to me
> > > like it stopped testing early.
> > >
> > > Lydia Duncan
> > >
> > > On 11/20/2013 08:56 AM, Chris Wailes wrote:
> > > I have access to a Cray XE6/XK7 (Big Red 2) at Indiana University and
> > >
> > > I'm trying to get it setup so that I can use it for testing.
> > > Unfortunately
> > > I've run into a situation where the paratest.server script is unable to
> > > find the files that the paratest.client scripts are supposed to
> generate
> > > to
> > > report back their results. I also don't see those files when I check
> for
> > > them manually.
> > >
> > > I've attached a copy of my PBS file, output and error files for my
> most
> > >
> > > recent run, and my .bashrc file. Any help with getting this working
> would
> > > be much appreciated.
> > >
> > > - Chris
> > >
> > >
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> > >
> > >
> > >
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> --
> Rafael Larrosa Jiménez
> Centro de Supercomputación y Bioinformática - http://www.scbi.uma.es
> Universidad de Málaga
>
> EMAIL: [email protected] Edificio de Bioinnovación
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>
>
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