> I’ll file a bug against gpsd for this case.

Well no need, this behaviour was deemed "correct" already.

> sudo gpsd -n -N -D3 -F /tmp/gpsd.sock /dev/ttyAMA1

Manually specifying /dev/pps0 here doesn't help?



On Wed, Sep 16, 2020 at 12:49 AM Ryan Govostes <rgovos...@whoi.edu> wrote:

> Seems like gpsd hardcodes /dev/ttyAMA0 as “oh you’re using a Raspberry Pi
> HAT” and then uses /dev/pps0, which would be the GPIO PPS source. Otherwise
> it searches sysfs to find the PPS device for the given NMEA device.
>
> The reason it has to have that hardcoded is because the kernel pps-gpio
> driver does not populate the `path` for the corresponding serial device
> with the NMEA feed. (Perhaps it should let you override it if that GPIO PPS
> source corresponds with a separate device.)
>
>
> https://github.com/torvalds/linux/blob/master/drivers/pps/clients/pps-gpio.c
>
> Since I’m using /dev/ttyAMA1, that hack doesn’t trigger.
>
> I’ll file a bug against gpsd for this case.
>
> Ryan
>
>
> On Sep 15, 2020, at 4:33 PM, Ryan Govostes <rgovos...@whoi.edu> wrote:
>
> I can confirm that /dev/ttyAMA1 streams incoming NMEA messages. I can
> confirm /dev/pps0 is a working PPS device.
>
> I can confirm that gpsd is configured to access /dev/ttyAMA1 and when I
> launch it with
>
> sudo gpsd -n -N -D3 -F /tmp/gpsd.sock /dev/ttyAMA1
>
> I see it getting a satellite fix, suggesting it is receiving NMEA messages
> just fine, although it has the /dev/pps1 error messages as below.
>
> If I use `strace` on gpsd, then I see that it connects to
> /var/run/chrony.ttyAMA1.sock (/var/run being a symlink to /run it should be
> OK):
>
> connect(8, {sa_family=AF_UNIX, sun_path="/var/run/chrony.ttyAMA1.sock"},
> 30) = 0
>
> I never see it reading or writing file descriptor 8, so it clearly is not
> sending anything to chronyd.
>
>
> It appears that /dev/pps1 is created some time after gpsd starts.
> /sys/devices/virtual/pps/pps1 appears and the path file contains the text
> /dev/ttyAMA1. gpsd scans through all of these pps/*/path files to find the
> one matching the NMEA device it is configured for, so that’s why it ends on
> /dev/pps1.
>
> I still don’t know who exactly is creating /sys/devices/virtual/pps/pps1 —
> strace doesn’t put the blame on either chronyd or gpsd, but otherwise this
> is a vanilla system I installed just a few days ago.
>
> Ryan
>
>
>
> On Sep 15, 2020, at 4:05 PM, Avamander <avaman...@gmail.com> wrote:
>
> Check what you have specified in the list of devices to be used.
>
> I personally couldn't convince gpsd to use pps1 instead of pps0, but you
> might be having the opposite issue :S
>
> What actually is pps1 on your system? It might play a role.
>
> On Tue, Sep 15, 2020 at 11:02 PM Ryan Govostes <rgovos...@whoi.edu> wrote:
> I’m not sure. Its logs look OK, but it prints out:
>
>        gpsd:INFO: KPPS:/dev/ttyAMA1 RFC2783 path:/dev/pps1, fd is 9
>
> Note that /dev/pps1 is _not_ the PPS device I expect to use. This device
> only appears while gpsd is running so it appears to be created by it?
> ppstest only reports timeouts for this one, while pps0 continues to work as
> expected.
>
> More context:
>
>        gpsd:INFO: KPPS:/dev/ttyAMA1 RFC2783 path:/dev/pps1, fd is 9
>        gpsd:INFO: KPPS:/dev/ttyAMA1 pps_caps 0x1133
>        gpsd:INFO: KPPS:/dev/ttyAMA1 have PPS_CANWAIT
>        gpsd:INFO: KPPS:/dev/ttyAMA1 kernel PPS will be used
>        …
>        gpsd:INFO: KPPS:/dev/ttyAMA1 kernel PPS timeout Interrupted system
> call
>        …
>        gpsd:INFO: KPPS:/dev/ttyAMA1 kernel PPS timeout Connection timed out
>
> Ryan
>
> On Sep 15, 2020, at 3:57 PM, Avamander <avaman...@gmail.com> wrote:
>
> However, `chronyc` does not report any updates being received from this
> source.
>
>
> If you aren't seeing anything on SHM1 either, then gpsd still has issues
> with reading the PPS source. Check its logs.
>
> On Tue, Sep 15, 2020 at 10:56 PM Ryan Govostes <rgovos...@whoi.edu> wrote:
> Ah OK, I guess the part that was not clear to me was that chronyd
> _creates_ this socket when configured with refclock SOCK, rather than
> simply connecting to it.
>
> When I configured this and restarted chronyd and then gpsd, it did create
> the socket file. However, `chronyc` does not report any updates being
> received from this source.
>
> I did not find an AppArmor profile that is currently being enforced on
> gpsd.
>
> I did notice that AppArmor was preventing chronyd from creating
> /run/chronyd.pps0.sock, so I corrected that and switched the configuration
> to:
>
>        refclock SOCK /run/chrony.ttyAMA1.sock refid GPS precision 1e-1
>        refclock SOCK /run/chrony.pps0.sock refid PPS precision 1e-7
>
> However I still do not receive any updates.
>
> Ryan
>
> On Sep 15, 2020, at 3:20 PM, Avamander <avaman...@gmail.com> wrote:
>
> but also I don’t see that socket you’re referencing being created.
> I don’t see any AppArmor logs that seem to indicate anyone was prevented
> from creating this file.
>
>
> Have you actually told chrony to create it?
>
> for a while but the PPS never updated:
>
>
> Yes, this is exactly why I suggested you check the AppArmor policy itself.
> When the pps device is inaccessible gpsd gives some vague error about the
> pps device and that's it. Open gpsd's log and verify it hasn't thrown an
> error about the pps device during startup.
>
> I couldn’t readily find much documentation on SHM 0 vs SHM 1.
>
>
> Yes, this is awfully documented online.
>
>
>
> On Tue, Sep 15, 2020 at 10:08 PM Ryan Govostes <rgovos...@whoi.edu> wrote:
> Below Bill argued against using /var/run/chrony.ttyAMA0.sock, but also I
> don’t see that socket you’re referencing being created. I don’t see any
> AppArmor logs that seem to indicate anyone was prevented from creating this
> file. Perhaps the version is too old?
>
> I couldn’t readily find much documentation on SHM 0 vs SHM 1. I did find
> this, which suggests using SHM 1 instead of having chrony go directly to
> the PPS device, as in:
>
>        refclock SHM 0 refid GPS precision 1e-1
>        refclock SHM 1 refid PPS precision 1e-7
>
>
> https://nam02.safelinks.protection.outlook.com/?url=https%3A%2F%2Fgpsd.gitlab.io%2Fgpsd%2Fgpsd-time-service-howto.html%23_feeding_chrony_from_gpsd&amp;data=02%7C01%7Crgovostes%40whoi.edu%7C86536cbb401c44a3c5cc08d859b6a884%7Cd44c5cc6d18c46cc8abd4fdf5b6e5944%7C0%7C0%7C637357988356257028&amp;sdata=N%2B8IAnmUrjXdPylbVOLjEXRfEGbG1QrLbGrToTbRHLU%3D&amp;reserved=0
>
> I restarted chronyd with this configuration and watched `chronyc sources`
> for a while but the PPS never updated:
>
>        210 Number of sources = 2
>        MS Name/IP address         Stratum Poll Reach LastRx Last sample
>
>        
> ===============================================================================
>        #* GPS                           0   4   377    22
>  +1104us[+4464us] +/-  100ms
>        #? PPS                           0   4     0     -     +0ns[
>   +0ns] +/-    0ns
>
> I disabled systemd-timesyncd as you suggested, thanks.
>
> Ryan
>
> On Sep 15, 2020, at 2:42 PM, Avamander <avaman...@gmail.com> wrote:
>
> First, disable systemd-timesyncd if you're using chrony: sudo systemctl
> disable --now systemd-timesyncd
>
> Second, enable chrony, pretty sure it isn't enabled by default after
> install: sudo systemctl enable chrony
>
> Why do you want to SHM 0 (non-PPS-corrected) NMEA time, instead of SHM 1
> or /var/run/chrony.ttyAMA0.sock?
>
> On Tue, Sep 15, 2020 at 9:36 PM Ryan Govostes <rgovos...@whoi.edu> wrote:
> Thanks, I removed the offset and delay so the reference clock
> configuration is now:
>
>        refclock SHM 0 refid GPS precision 1e-1
>        refclock PPS /dev/pps0 refid PPS
>
> My intention is to have GPS set the system date and time and then have the
> PPS signal keep it from drifting.
>
> After applying this, I ran again and am now getting:
>
>        MS Name/IP address         Stratum Poll Reach LastRx Last sample
>
>        
> ===============================================================================
>        #x GPS                           0   4   377    16   +587us[
> +587us] +/-  100ms
>        #x PPS                           0   4   160    82   -128ms[
> -128ms] +/-  759ns
>
> The #x suggests that “time may be in error.” However I am still seeing
> gpsd work (monitored via cgps) and the PPS device still appears to be
> working (according to ppstest).
>
> Furthermore timedatectl suggests that the system clock is not synchronized:
>
>        $ timedatectl status
>        Local time: Tue 2020-09-15 18:34:48 UTC
>        Universal time: Tue 2020-09-15 18:34:48 UTC
>        RTC time: n/a
>        Time zone: Etc/UTC (UTC, +0000)
>        System clock synchronized: no
>        systemd-timesyncd.service active: yes
>        RTC in local TZ: no
>
> What appears to be the problem?
>
> Ryan
>
> On Sep 15, 2020, at 12:47 PM, Bill Unruh <un...@physics.ubc.ca> wrote:
>
>
>
> William G. Unruh __| Canadian Institute for|____ Tel: +1(604)822-3273
> Physics&Astronomy _|___ Advanced Research _|____ Fax: +1(604)822-5324
> UBC, Vancouver,BC _|_ Program in Cosmology |____ un...@physics.ubc.ca
> Canada V6T 1Z1 ____|____ and Gravity ______|_
> https://nam02.safelinks.protection.outlook.com/?url=http%3A%2F%2Fwww.theory.physics.ubc.ca%2F&amp;data=02%7C01%7Crgovostes%40whoi.edu%7C86536cbb401c44a3c5cc08d859b6a884%7Cd44c5cc6d18c46cc8abd4fdf5b6e5944%7C0%7C0%7C637357988356257028&amp;sdata=EkXZPly9ps2U3qVb7qot7CxssLBlwUCyqTblGkx8FKo%3D&amp;reserved=0
>
> On Tue, 15 Sep 2020, Ryan Govostes wrote:
>
> Hi all,
>
> I am setting up chronyd on an embedded Linux device to synchronize the
> system clock using a GPS module. The GPS device sends NMEA strings over the
> character device /dev/ttyAMA1 and I have also configured /dev/pps0, both of
> which appear to be working OK.
>
> The system is running Ubuntu 18.04 and the latest package versions are
> chronyd 3.2 and gpsd 3.17.
>
> I configured gpsd to listen to the serial device and then added these
> lines to my chrony.conf:
>
>     refclock SHM 0 refid GPS precision 1e-1 offset 0.9999 delay 0.2
>
>
> Why those figures for ooffset? That is 1 sec offset. NMEA is not that bad.
>
>
>     refclock PPS /dev/pps0 refid PPS
>
> When I run `chronyc sources` they both seem to be kind of working:
>
>     210 Number of sources = 2
>     MS Name/IP address         Stratum Poll Reach LastRx Last sample
>
>     
> ===============================================================================
>     #- GPS                           0   4   377    12   +128ms[ +128ms]
> +/-  200ms
>     #* PPS                           0   4   377    12     +6ns[ +119ns]
> +/-  203ns
>
> However it looks like the GPS source is “not combined”. Is this a degraded
> state, e.g., it is using one of these two sources?
>
>
> Why would one want to combine GPS with PPS. PPS is good to the nanosecond
> level. GPS toabut 100 ms -- that is almost a  million times worse. It
> would be like combining your wristwatch with some clock which says "its
> spring so it must be April".
>
>
> Also, I am not sure why the LastRx from the PPS (or frankly either) ticks
> upwards so long—shouldn’t it constantly be receiving updates?
>
>
> Yout tell it that POLL is 4 which means 16 seconds. So every 16 seconds
> that
> clock is read. The driver massages the input ( once a second) to get rid of
> obvious outliers but reports to chrony once every 16 seconds. Note it is a
> bad
> idea to reduce the poll even further. Then obvious ouliers are not thrown
> out,
> and the ability to determine the rate of the clock is degraded.
>
>
> I am just using the precision / offset / delay figures that several
> examples use. Is there documentation on calibrating these values?
>
>
> Get rid of the offset and delay. The GPS is useless except for setting
> actual
> number of the seconds.
>
>
> Finally, I read that using Unix sockets rather that shared memory is
> preferable, but my chronyd does not seem to create those sockets.
>
>
> Why is it better? Leave things as they are. With PPS your time will be
> accurate to microseconds just as things are now. Do you need any better
> time?
> If you do need time to nanoseconds, then you will really have to throw away
> your computer (its ability to read interrupts is only at the microsecond
> level) and begin compensating for propagation delays in your gps unit, and
> also the sawtooth offset on the ns level due to your gps receiver innards.
> But
> then, why would you want to know the time to 1 billionth of a second?
>
>
>
>
>
>
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